Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2516 ATGTCCATTTTCGAATTTACAAGTGATACCCGTTTAAGCTCCCTATATCATCTCGACCTTACAAGTTGCAAGAGTCTAAGGAAGTTGTCTGTGACATCAGAGAATATAACAGAACTGCATTTGTCGGGTATTCCTGCCAATGCATTGCTTTCATCTTTTGCATGTCAAAGGAAGCTAGAAACCCTGAGTTTATTCGGCAGCCAATATGAGAGCTTACCTTCAAGCATCAAGAATCTTACAAGATTGCGAAGTCTAGAGTTAAGTAGAAGCTCTTTCCTTCTGTCAATTCCAGAGCTTCCGCTGTCCCTTGAAACCCTATCAGCCATCGCATGCAAATCACTAAAGACAGTATTCTTCCCTTCAACGGCTGCTGAACAATTCAAGGAAAACAAGAAAATGGTTCAGTTCTTGAATTGCTTGAACTTGGATGAACGTTCACTCAGGGATATTGGGTTGAATGCACAAATAAACTTGATGAAACTTATACATCAACATTCTTCTATTCGAGAACACGATGATTACATTGAAAACTATAGACATGACATAGCTGAATATGACTTTCAATCAGTGTATGTGTATCCAGGATGCAGTGTTCCAAAGTGGTTGGAGTATGAGTCAACAAAGGATGACATGATTATTGATCTCTCTCTAGATCAACTCTCTCCTTTAGGTTTCATTTTTTGCTTCATTCTTCCTAAGGACTCAAAAGACCATCTTACTTCAGTTAAATTTGAAATCACTATAATTGATGGTGGGTGTGATGGTAAAAAGGGCAGTTTCAATATCAACTTGACAGAGGGCAGCTATTCAAAGGCTTCATTTATTTATTCAGATCATGTGTGCCTGACATACAACAAAAAATGTTCCCGCTACGTATCTAGTGCAGCCAAAAATCAGACAAGGTTTAAAATCAAGGTTGCAGCATGGGCAGAAAAATATGGAGAGGGTCGAGAGCAGAAGTTAAGAGGGTTTGGAGTCAGCCCTGTTAACACGTTGAGGAAAAACTGGCCTTCTGGATGTGAGACAATGCCTCAGGGAGTTGTTGCTAGAGCATCAAACTTGGAATTGCGACCCTTATGGGACTCTGGCATAAATAAGATATGGAGACAAGCTTTGAACAAATGTTCTAATTTAGCGGGAATCAAGTCATCAGATTTTCGGAACGATGCTGATCTGCTTGAAGAAATCATCAGTCGTGTGTTGATGAGGTTGAGTAAGCATCATGGGACTGAGGCTATTAGAAGCATAACAATAGACTGTTCAGTATTTTGGAATCTGCAGTTAAGCCCTTACGTATTTGAAAAGATGAGCAAGGTACAATTTTTGGAAATTCATGGCAGAGGTTATGGGAAGAACGAGGATCTTCTTCTTAAAGGGTTTAAATTTTGGCCAACTAATCTGAAATATCTTCGTTGGATGCATTACCCTCTAAAATCGTTGCCAGAGAATTTTTCTAAGGAAAATCTTGTTATATTGGAGTTGCCACGAGGCCGGATGCAAAAACTTTGGAACGGACTGAAGGTGAATATATTTGTGTCTTTCCTCCTTTTTCAATATTTCTTAATTGAAGGATAA 1575 0.3911 MSIFEFTSDTRLSSLYHLDLTSCKSLRKLSVTSENITELHLSGIPANALLSSFACQRKLETLSLFGSQYESLPSSIKNLTRLRSLELSRSSFLLSIPELPLSLETLSAIACKSLKTVFFPSTAAEQFKENKKMVQFLNCLNLDERSLRDIGLNAQINLMKLIHQHSSIREHDDYIENYRHDIAEYDFQSVYVYPGCSVPKWLEYESTKDDMIIDLSLDQLSPLGFIFCFILPKDSKDHLTSVKFEITIIDGGCDGKKGSFNINLTEGSYSKASFIYSDHVCLTYNKKCSRYVSSAAKNQTRFKIKVAAWAEKYGEGREQKLRGFGVSPVNTLRKNWPSGCETMPQGVVARASNLELRPLWDSGINKIWRQALNKCSNLAGIKSSDFRNDADLLEEIISRVLMRLSKHHGTEAIRSITIDCSVFWNLQLSPYVFEKMSKVQFLEIHGRGYGKNEDLLLKGFKFWPTNLKYLRWMHYPLKSLPENFSKENLVILELPRGRMQKLWNGLKVNIFVSFLLFQYFLIEG* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2516 524 Gene3D Ribonuclease Inhibitor 337 510 IPR032675 -
Lja3g2516 524 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 416 512 IPR044974 GO:0006952
Lja3g2516 524 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 331 - -
Lja3g2516 524 SUPERFAMILY RNI-like 11 169 - -
Lja3g2516 524 Gene3D Ribonuclease Inhibitor 5 156 IPR032675 -
Lja3g2516 524 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 416 512 - -
Lja3g2516 524 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 331 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2516 Lja-Chr3 32213266 32233984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2516 409 508 WRKY Transcription Factor Family AT4G12020 38.835 9.05e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2516 - - lja:Lj0g3v0341759.1 638.262