Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2469 ATGGCGGTTGAACTAGTTGGAGGTGCTCTTGCTTCCGCTTTCTTTCAGGTCACATTTGAAAGGCTAGCTTCTGCTGATATTCTGGCCTACTTTCGTGGAAGAAAACTCAATGAGAAGCTGCTCAAAAAGCTCCACATCATGCTGCTATCCATCAATGCTGTTGTTGATGATGCAGAGCTAAAGCAGATCAGAAATGGAAACGTGAAAGCATGGCTTGATGCTGTCAAGGATGCTGCCTTTGATGCAGAGGATCTCTTGGATGAAATAGACGCTCAACTCTCCCTAAAAAACCAGGAAGCTGAATCTCAGCCCACTGCCAGCAAGGTATGGAATTTCTTCAATGCTACTGTGAGTGCATTTGATAAGGAAATTGAACCAAGGATGCAAGAAATCCTTGACAACCTAGAATATCTTGCTAGGCAAAAGGATATACTAGGTTTGAGAGAGGGAGCTGGTTTTGGTGTTGGGTCAACTAGGCAAGTGTCACAAAAATTGCCATCAACATCTTTGTTTGGTGAAACTGTTATATATGGTAGACACCATGACAAAGGCACTGTCTTTGGTTGGTTGATGTCCGACTCTGAGAATGATGACCATCAGCTGTCCATAATTTCTGTAGTGGGTATGGGCGGCATGGGTAAGACCACTCTTGCCCAACATTTATACAATGACCCAAGGCTGGAGGGTAAATTTGACATCAAAGCTTGGGTCTGTGTTTCAGATGACTTTGATGTTTTTAAGGTGACAAGAGCAATTCTAGATGAAATCACTAGATCCAGTGATGACAGCAGAGAGCTCAATACGCTTCAGGTAAAACTGAAAGAAAAGTTGATGGGGAAGAGCTTTCTTCTTGTTTTGGATGACGTTTGGAATGAAGATCACATGCAATGGGAATCTCTCCGAGCTCCTTTCAGCAGTGCTGCTCAAGGAAGCAAAATTCTGGTCACTACACGCAGTATGAAAGTTGCTTCAATCATGCGATCAAATCAGACCTGTCAGCTAGAACAATTACAAGAACAACATAGTTGGCAATTGTTCTCTAAGCATGCATTTCAGGATGAGAATTCTCAGTTAAATCCAGACTTTAAGGAGGTTGGTATAAAGATAGTTAGAAAATGCAAAGGCTTGCCTCTAGCCTTGAAAAGTATTGGAAGTCTCTTATACACAAAATCATCTTCATTGGAATGGGAGAGAATATTGAAAAGTGAGGTATGGGAGATACCAGAAGCGGATAACAATATCATCCCTGCTTTAATACTAAGCTATCAATACCTTCCTTCTCATCTGAAGAGATGCTTTGCTTATTGTTCTTTATTCCCCAAAGGCTATGTGTTTGAGAAAGAGGATTTAGTTCTACTATGGATGGCAGAAAAGTTTCTAAAATGTTTTCAGAAGGGTAAGAGTATAGAAGAAGTGGGTGAAGAGTACTTTAATGATTTGTTATCGATGTCTTTTTTTCAACATTCAAGGGGAGATCGAAGGAAATTTGTCATGCATGACCTTCTCAATGATTTGGCAAAATATGTGTCTGGGGATTTTGCTTACAGGTTGGAGGTTGAAGAAGCACAAAATATATCGAAAATGATTCGTCATTTTTCATTTTTAAGAAGTAAATATGAAGCTTCTGAAAGATTTGATGCATTGTACAATACCAATCGATTACGAACATTTCTACCATTAGGTAGGAATGCCAACGTACTCTTTCGCTCACCCTTCTGGATATCTGACGTGTTGGTGCATGCATTGGTCTCCAAGTTCAAGTATTTGCGTGCCTTATCTTTTTCTGGTTATGGGGTGTTTGAGTTGCCTGACTCAGTAGGCAATCTTATACATCTGCGTCATCTAGACCTTTCTTGTACCCTCATAAAAAAGTTACCTGATTCAATATGTTTTCTCTATAACTTAGAGACATTGAAGTTGAAGGAATGCCAATCTTTGGAAGAGCTGCCCTTGAATTTGCATAAACTCACTAAATTGCGCTATCTTGATTTTAGTGGAACAAAGGTGAGAAAAATGCCAATGCACTTGGAAAAATTAAACAATCTTCAAGTACTGAATTCATTTTATGTGGGAAAAGGTGGTGAGTATAATATTCAGCAATTAGGTGAACTCAATCTTCATGGAGCACTATCAATTTTTGAGCTGCAGAATATTGTCAATCCCTCGGATGCATTAACAGCAAATTTAAAAAATAAAGTACACCTCGTGAAGCTTGAGTTAGAATGGAGTGCAAACGATGATGATTCACAGAAAGGAAGAGAAGTTCTTGAGAAGCTGCAACCTTCCAAACACTTGAAGAAGCTATCAATTAGCAACTATGGCAGTACCCGATTTCCAGATTGGTTTGGAGATAATTCGTTGTCTAATGTGGTGTCCATAACATTGAGATATTGCGTCAATTGTGTGTCATTGCCTTCCTTTGGGCTGTTGCCATCTCTGAAGAAGCTTTCAATTATTGGGCTCCATGGGGTAGTGGTAATTGGTGGTGAGTTTTATGGGAACGGGAGTTCTACTATTCCATTTGCATCATTGGAAAGATTAGAATTTGAGGATATGAAAGAATTGGAAGAATGGGAATGTAAAAGAGTGGGGGATTTTTTTCCACGCCTCGAAGACCTTATTGTTTCGAATTGTCCCAAGCTAAAAGAGCATTTGCCGAAACAGCTTCCTTCTTTGAAGCTATTATCTATTAATTGCTGTTTTCGGCTTGTGGGTTCTGTTCCATTGGCTCCATCCATTCAAAAATTGAATCTACATAACTGTGGAAAGCTGCAATTTGGTCATAATCCCTCTACTCTTCAAAGGCTCAGGATTGGTGGACGTTGCATGAAAGGTTCGTTGCTTGAAAGCATTTGGCACACCATATCTAATAATACCTCTCTTGTTGAATTACTAATTGTTACTTGCCCAAATATGAACATTCCCATTAGCCCTTGCTACAAATTCCTTGTATCATTGACCATCATTGATAGCTACAAATCTCTAAGGATCTTTCCTCTGCATTTCTTCCCCAATCTCAATTCTCTCGAACTGGTGCGTTGCCCCAATCTTGAAATGATTACACAGGAGGAGCATGGCCATAATCTCACTAAGCTGAATATCCTATGGTGCCCTAAGTTTACATCATTTCCCAAAGGAGGACTCTCTGCACCGAGGCTACAGAATTTTAATATTAGTGGATTGGAGAATTTAAGATCATTGCCTGAAAGCATGCATATCCTTCTTCCATCTCTTGATGAGCTCAACATATGTGATTGTCCACAACTGGAGCCGTTCTCTGATGGAGCTTTGCCGCCAAACCTACAATATTTGATTCTTGGAAAACGTTTTATGCCATCACTGATACAGGCTTTGGCAGCCAACACTTCTCAGCTTCGCTTGCGTTTCACATTAATGGATGATGTGGAGTGTTTTCCTGATGAAGGGTTGCTGCCACACTCACTCACTTCTCTGGAGATATATAATTTTCCAAATCTTACAAAACTGGACTACAGGGGTCTCTGCCACCTCCCCTCTCTCACAGAATTGCATCTTTTTAACTGCCCCGGACTACAATGCTTTCCGGAGGAGGGTCTTCCTAAATCCATTTCAAAATTATCTATTCGACGCAACTGCCCGTTGCTCAAACAGCGTTGCCAGAAACCAAATGGTGAAGATTGGGGGAAGATTAGTCACATTCAATGGATATATATTGATGATGAGTGA 3705 0.4027 MAVELVGGALASAFFQVTFERLASADILAYFRGRKLNEKLLKKLHIMLLSINAVVDDAELKQIRNGNVKAWLDAVKDAAFDAEDLLDEIDAQLSLKNQEAESQPTASKVWNFFNATVSAFDKEIEPRMQEILDNLEYLARQKDILGLREGAGFGVGSTRQVSQKLPSTSLFGETVIYGRHHDKGTVFGWLMSDSENDDHQLSIISVVGMGGMGKTTLAQHLYNDPRLEGKFDIKAWVCVSDDFDVFKVTRAILDEITRSSDDSRELNTLQVKLKEKLMGKSFLLVLDDVWNEDHMQWESLRAPFSSAAQGSKILVTTRSMKVASIMRSNQTCQLEQLQEQHSWQLFSKHAFQDENSQLNPDFKEVGIKIVRKCKGLPLALKSIGSLLYTKSSSLEWERILKSEVWEIPEADNNIIPALILSYQYLPSHLKRCFAYCSLFPKGYVFEKEDLVLLWMAEKFLKCFQKGKSIEEVGEEYFNDLLSMSFFQHSRGDRRKFVMHDLLNDLAKYVSGDFAYRLEVEEAQNISKMIRHFSFLRSKYEASERFDALYNTNRLRTFLPLGRNANVLFRSPFWISDVLVHALVSKFKYLRALSFSGYGVFELPDSVGNLIHLRHLDLSCTLIKKLPDSICFLYNLETLKLKECQSLEELPLNLHKLTKLRYLDFSGTKVRKMPMHLEKLNNLQVLNSFYVGKGGEYNIQQLGELNLHGALSIFELQNIVNPSDALTANLKNKVHLVKLELEWSANDDDSQKGREVLEKLQPSKHLKKLSISNYGSTRFPDWFGDNSLSNVVSITLRYCVNCVSLPSFGLLPSLKKLSIIGLHGVVVIGGEFYGNGSSTIPFASLERLEFEDMKELEEWECKRVGDFFPRLEDLIVSNCPKLKEHLPKQLPSLKLLSINCCFRLVGSVPLAPSIQKLNLHNCGKLQFGHNPSTLQRLRIGGRCMKGSLLESIWHTISNNTSLVELLIVTCPNMNIPISPCYKFLVSLTIIDSYKSLRIFPLHFFPNLNSLELVRCPNLEMITQEEHGHNLTKLNILWCPKFTSFPKGGLSAPRLQNFNISGLENLRSLPESMHILLPSLDELNICDCPQLEPFSDGALPPNLQYLILGKRFMPSLIQALAANTSQLRLRFTLMDDVECFPDEGLLPHSLTSLEIYNFPNLTKLDYRGLCHLPSLTELHLFNCPGLQCFPEEGLPKSISKLSIRRNCPLLKQRCQKPNGEDWGKISHIQWIYIDDE* 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2469 1234 Gene3D Ribonuclease Inhibitor 1097 1219 IPR032675 -
Lja3g2469 1234 Gene3D Ribonuclease Inhibitor 945 1096 IPR032675 -
Lja3g2469 1234 PANTHER DISEASE RESISTANCE PROTEIN RP 17 1006 IPR044974 GO:0006952
Lja3g2469 1234 Pfam NB-ARC domain 184 422 IPR002182 GO:0043531
Lja3g2469 1234 PRINTS Disease resistance protein signature 203 218 - -
Lja3g2469 1234 PRINTS Disease resistance protein signature 630 646 - -
Lja3g2469 1234 PRINTS Disease resistance protein signature 276 290 - -
Lja3g2469 1234 PRINTS Disease resistance protein signature 373 387 - -
Lja3g2469 1234 Gene3D Ribonuclease Inhibitor 574 944 IPR032675 -
Lja3g2469 1234 SUPERFAMILY L domain-like 911 1224 - -
Lja3g2469 1234 Gene3D - 29 129 - -
Lja3g2469 1234 Pfam Rx N-terminal domain 12 102 IPR041118 -
Lja3g2469 1234 Gene3D - 157 333 IPR027417 -
Lja3g2469 1234 PANTHER OS05G0414200 PROTEIN 17 1006 - -
Lja3g2469 1234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 436 IPR027417 -
Lja3g2469 1234 Gene3D - 336 420 IPR042197 -
Lja3g2469 1234 SUPERFAMILY L domain-like 490 937 - -
Lja3g2469 1234 Gene3D - 421 508 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2469 Lja-Chr3 30951272 30958801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2469 204 680 WRKY Transcription Factor Family AT5G45050 25.532 1.06e-14 77.4