Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2445 ATGACACAAGATGATGGTGGTTATGTCATAAATTTCAATGAAGAAGAGCTCAAAATCATCCAAGACTTCAAGAGAGGAAATGACTATATTGAAGTTTATTGTGGCACTACAAACAAAAAATACGGAGATTTTGCTGGGAGGCTAAGAATCAATGGGAAAGGCCAATTTCTCATCACTTGTCAATGTTGCTCTGAGTGTACTCTAGAGAATTTGACTCCAGAAGAATTTGAGAAACATGCTGGAAAAGAAGGGGGTGGAAAATGGAAAAACAACATCTGGGTTCATGAGGAAAAAGAGGACAGAGTTCCAATTTCAAAGACACCTTTGTTACAATATTACACACATCAAGCAAACGTGTCTAATTGGATTGATTCTGTGAACCGTAAGCGAAACTTTCACAGGGATGAATTCATTCGTTGTTCAAGCTGCAACAAGAGGCGCAGGTTTCGTCTCAACTGCAGGGACGAAATCCGCATCTACCATGCTGCTATGAACAACAAAATGTGGAGTTGTTCTGATTGGCCTTATCAGAAATCAAGTGTTAGGAGTTGCAGGGTTTGTCCTCGTTATTCATTATGCCAAGGTTGCTCATCTTGTTACTGTGGAGGTTGCATCAAGTGTCGCTTTGAGGATTGCGATTGTCAAGAATGTAGAGACTTCATGCTATTTGCAGAACCCTAG 681 0.4038 MTQDDGGYVINFNEEELKIIQDFKRGNDYIEVYCGTTNKKYGDFAGRLRINGKGQFLITCQCCSECTLENLTPEEFEKHAGKEGGGKWKNNIWVHEEKEDRVPISKTPLLQYYTHQANVSNWIDSVNRKRNFHRDEFIRCSSCNKRRRFRLNCRDEIRIYHAAMNNKMWSCSDWPYQKSSVRSCRVCPRYSLCQGCSSCYCGGCIKCRFEDCDCQECRDFMLFAEP* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2445 226 PANTHER PROTEIN ULTRAPETALA 2-LIKE 12 226 - -
Lja3g2445 226 Pfam SAND domain 60 95 IPR000770 GO:0003677
Lja3g2445 226 PANTHER PROTEIN ULTRAPETALA 1 12 226 IPR020533 -
Lja3g2445 226 Gene3D - 25 127 IPR010919 -
Lja3g2445 226 SUPERFAMILY SAND domain-like 21 95 IPR010919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2445 Lja-Chr3 30219119 30221067 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Lja3g2445 SAND 7.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2445 - - gmx:100818259 323.168