Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja3g2430 | ATGGTGTTGTCAGCTTCGCCATGTTCTTTGGCGAGAAGCTCGCTGGAAGAGATGCTTGATTCGCTTCGTCGGAGGGATGAAGAGGAAGAGACGAAGAAGGACTCGCCGCCGGCGTTGCCCGCTCGGCCGGCTTCCAAGGCTCGGCTTCCTCCGGCGCGGCGGTCGCTGCCGAATAACTTTAAGGTTGGTGGTGGTGACCGCGGTGGCGCGGTGGAGAATGGATTTGCTGTCAGCAATGTGGAGATTAAGAGGAAGGAAACGGGTGTTGTAGACAAGAGAAGTAGTAGCAGTTTTGGGAGTAAGAGGGTGAAGAAGGATGTGGAGTCTCCTTATGTGATAGCACTTTCAGAATTCACTGGTTTATCTGGGATGAGTTTGGAATTGGAGGGTGACAGTGTTTCTCATTTCATCAAAACGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGAAATGGGAACTAGGATCAATAAAGTCAACTTCTGGAGAGGAAGCATCCGTTTCACTTTCAAATGGCAATGTTGTGAAAGTGGCCAGATCAGAGCTCTTACCTGCTAATCCTGATATTTTAGACGGTGCGGATGATCTTATTAAACTTGGTTATCTGAATGAACCATCAGTTCTTCACAATCTTAAGTTTAGATATTCTCAGGATATGATTTATACTAAAGCAGGCCCCATTTTAATCGCACTAAATCCTTTGAAAGATCTCACTCTTTATGGAAATGATTATATCTCAACTTATAGGCAGAGATTAATTGATAGTCCTCATGTTTATGCTATGGCAGATGCTGCTTATAACAAGATGATAAGAGATGAAGTAAATCAATCCATAATCATTAGTGGTGAGAGTGGGTCTGGGAAGACAGAGACAGCTAAAATCGCCATGAAATACTTATCTGCTCTTGGTGGTGGCAGCTGTGGGATAGAAAAAGAAGTTCTTCAGGCAAATTTTATACTAGAAGCTTTTGGGAATGCAAAATCATGTAGCAATGACAACTCTAGCAGATTTGGAAGTTTGATTGAAATTCATTTCAGCACCATGGGTAAAATGTGTGGGGCTAAAATTCAAACATATCTGTTGGAAAAGTCAAGAGTAGTTCAACTGGCTGTTGGCGAGAGGTCTTATCACATATTTTATCAACTCTGTGCTGGATCTTCACCTGGTCTTAAAGAAAGACTGAATCTTAGATCAGTCAGCGATTATAAATATCTAAATCAGAGTGGTTGTGCGACAATTGGTGGTGTTGATGATGCTAAAAACTTTCATCAGCTGATGGAAGCATTGGATACTGTTAGAATTTGTAAAGAGGACCAGGAGCTGATCTTTAAGATGCTTGCAGCAATACTATGGTTGGGAAATATAACATTCCAAGTAACTAACAATGAAAATCATATTGAGGTTGTGGATGATGAAGCTGTAACCAGTGCTGCCCTGCTGATGGGTTGCAGTTCTCAAGAATTAATGGCAGCATTATCTACCTGTAAAATCCAATCTGACAAGGATACCATTGCCAAAAGTTTGACATTGTCACAGGCAATCAATACAAGAGATGCAATTGCAAAATTTATCTATGCAAGCTTGTTTTACTGGCTTGTAGAGCAAATTAACAAGTCACTTAAAGCCGGTAAAAAATGTGCTGGGAAATCCATAAGCATCCTTGACATTTATGGTTTTCAGTCATTACAGAAAAACAGCTTTGAACAGTTTTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTTAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAGTTGGATGGAGTAGATTGGACCACAATAGATTTTGAGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCTCTTGGTCTACTCTCTTTGTTAGATGAGGAATCAAATTCCCCCAGTGCTTCTGATTTAACATTTGCCAACAAACTTAATCAACTGCACGGTAATCCTTGCTTCAAAGGGGGAAAAGACAGCGCTTTCAGTGTTCGCCACTATGCAGGGGAGGTTTTGTATGATACAAATGGTTTTCTAGAAAAGAACAGAGATACACTGTCTTCTGACTTCATTCAACTCCTGTCATCGTGTAATTGTGAACTGCTTCAGTTATTCTCCAAAATGTTTAATCAGTCTCAGAAACAACCAAATTCCTCCTTCCACATTGGTTCACTGGACTCACAGAAGCAGGGTGTTGGAACAAAGTTCAAGGATCAATTGTTCAAGTTGATACATCAGGTGGAGAGCACTGCACCTCACTTTATTCGCTGCATAAAACCAAATACGAAGCAGCTTCCTGGAATTTATGAGGATGATCTTGTCCTACAACAGCTCAGGTGTTGTGGAGTTCCAGAAGTTGTTCGGATTTCTAAGGCAGGATATCCTACTCGCATGACTCATCAAGAGTTTTCCAGAAGGTATGGGTTTCTGCTTTCTGAGGCCATTGTATCTCAGGATCCATTGAGTATCTCAGTCGCTGTTTTGCACAAATATGATACCCCTTCTGAAATGTACCAAGTTGGCTACACCAAACTGCACCTTCGAGCAGGGCAGATTAATGCACTGGAGGATAAGAGAAAGCAGCTTTTGCAGGGAGTACTTACGATTCAAAAATGCTTCCGTGGTCATCAAGCTCGCAGTAATTTCTGTGAACTTAAGAGTGGAGTGGCAACCTTGCAATCATTTATTCGTGGAGAAATTACGAGAAGGAAGTCTGGTGTTATGATGAAGTCTTCTATAACAATTTATTCTAAAAAGCTTGAAGAGATACATGCAATCATACTACTACAATCTGTAATTCGTGGGTGGCTGGTTCGAAGTGATTCTAGCAATATGAAGTTGAGGAAACATGAAAATGACAAACCTAGGTGGAAGTCTCGAGTTAAGATTCCAGAAGTGAAGGATTTGTCCAAAGACCTGGTTCAGAATCTGCCTTCAGCTTTAGCAGAACTCCAAAAGCGGTTTTATAAGGCTGAAGCAATTTTGGAGCAAAAGGAAGAGGAAAATACTGAGTTGAAGGAACAGTTAAAACAATCTGAGAGAAAGAGGGTTGAATTTGAGGCGAAGATGAAATCAATGGAGGAGGCATGGAAAAAGCAGATGACATCTTTGCAAATGAGTCTTGTTGCTGCTAAAAAGAGCCTTGCTTCTGAGAATGGCACTGTTCAACCTGTAAGAAGTGATCCTTTGTCACCTCGTGGCTATGATTCTGAAGATACTACTTCCATGGGATCTCGAACAACTGGTGGGAACACACCTCTGATGTTATCAGGGAGTCTCTCTGTCTCAGATCCAAGGAGACAGGCTAACGGTACATTGACTACTGTCAGCAGTCTGATGAGGGAATTTGACCAACAAAGACATACATTTGATGATGAAGTGAAAGCTCTGACTGAGGTAAAACCAGGGCAGTCTGTAAACACGAATTCCATTGAAGAACTTCGGAAGCTCAAACGTACATTTGAGGGATGGAAGAAACAGTACAAAGTTAGATTACGTGAGACAAAAGCAAGGCTTCATAAATTAGGGAATTCAGAATCTGAAAGAAGTCGGCGGACATGGTGGGGAAAATTAAGGGCATAA | 3585 | 0.4142 | MVLSASPCSLARSSLEEMLDSLRRRDEEEETKKDSPPALPARPASKARLPPARRSLPNNFKVGGGDRGGAVENGFAVSNVEIKRKETGVVDKRSSSSFGSKRVKKDVESPYVIALSEFTGLSGMSLELEGDSVSHFIKTKLRVWCRQPRGKWELGSIKSTSGEEASVSLSNGNVVKVARSELLPANPDILDGADDLIKLGYLNEPSVLHNLKFRYSQDMIYTKAGPILIALNPLKDLTLYGNDYISTYRQRLIDSPHVYAMADAAYNKMIRDEVNQSIIISGESGSGKTETAKIAMKYLSALGGGSCGIEKEVLQANFILEAFGNAKSCSNDNSSRFGSLIEIHFSTMGKMCGAKIQTYLLEKSRVVQLAVGERSYHIFYQLCAGSSPGLKERLNLRSVSDYKYLNQSGCATIGGVDDAKNFHQLMEALDTVRICKEDQELIFKMLAAILWLGNITFQVTNNENHIEVVDDEAVTSAALLMGCSSQELMAALSTCKIQSDKDTIAKSLTLSQAINTRDAIAKFIYASLFYWLVEQINKSLKAGKKCAGKSISILDIYGFQSLQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGVDWTTIDFEDNQECLDLFEKKPLGLLSLLDEESNSPSASDLTFANKLNQLHGNPCFKGGKDSAFSVRHYAGEVLYDTNGFLEKNRDTLSSDFIQLLSSCNCELLQLFSKMFNQSQKQPNSSFHIGSLDSQKQGVGTKFKDQLFKLIHQVESTAPHFIRCIKPNTKQLPGIYEDDLVLQQLRCCGVPEVVRISKAGYPTRMTHQEFSRRYGFLLSEAIVSQDPLSISVAVLHKYDTPSEMYQVGYTKLHLRAGQINALEDKRKQLLQGVLTIQKCFRGHQARSNFCELKSGVATLQSFIRGEITRRKSGVMMKSSITIYSKKLEEIHAIILLQSVIRGWLVRSDSSNMKLRKHENDKPRWKSRVKIPEVKDLSKDLVQNLPSALAELQKRFYKAEAILEQKEEENTELKEQLKQSERKRVEFEAKMKSMEEAWKKQMTSLQMSLVAAKKSLASENGTVQPVRSDPLSPRGYDSEDTTSMGSRTTGGNTPLMLSGSLSVSDPRRQANGTLTTVSSLMREFDQQRHTFDDEVKALTEVKPGQSVNTNSIEELRKLKRTFEGWKKQYKVRLRETKARLHKLGNSESERSRRTWWGKLRA* | 1195 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja3g2430 | 1194 | SMART | MYSc_2a | 185 | 862 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lja3g2430 | 1194 | ProSiteProfiles | IQ motif profile. | 923 | 952 | IPR000048 | GO:0005515 | |
| Lja3g2430 | 1194 | Pfam | IQ calmodulin-binding motif | 867 | 883 | IPR000048 | GO:0005515 | |
| Lja3g2430 | 1194 | Pfam | IQ calmodulin-binding motif | 925 | 941 | IPR000048 | GO:0005515 | |
| Lja3g2430 | 1194 | Gene3D | - | 560 | 751 | - | - | |
| Lja3g2430 | 1194 | MobiDBLite | consensus disorder prediction | 1068 | 1101 | - | - | |
| Lja3g2430 | 1194 | PANTHER | MYOSIN | 122 | 1192 | - | - | |
| Lja3g2430 | 1194 | Coils | Coil | 982 | 1030 | - | - | |
| Lja3g2430 | 1194 | SMART | iq_5 | 885 | 907 | IPR000048 | GO:0005515 | |
| Lja3g2430 | 1194 | SMART | iq_5 | 862 | 884 | IPR000048 | GO:0005515 |
Showing 1 to 10 of 34 entries
Duplication type information
Functional genes information
Pathway information