Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2429 ATGGCGCTTGAACTCCTTGGAGGTGCTCTTGCTTCTGCTTTCTTTCAGGCCACATTTGACAGGCTTGCTTCTGCTGATATTTTGGCCTACTTTCGTGGAAGAAAACTCAATGAGAAGCTGCTCAAAAAGCTCCACATCATGCTGATGTCCATTAATGCTGTTGTTGATGATGCAGAGCTAAAGCAGATCAGAAATGGAAATGTGAAAGCATGGCTTGATGCTGTCAAAGCTGCTGCCTTTGATGCAGAGGATCTCTTGGATGAAATAAACACTCAACTCTCCTGGTGCAAGCAAGAAGCTGAATCTCAGTCCAGTGCTAGCAAGGTATGGAATTTCTTCAATGCTAATGTCACTTCATTTGACAAAGAAATTGAACCAAGGATGCAAGAAATCCTTGACAACCTGGAATTTCTTGCAACACAAAAGGATATACTAGGTCTGAGAGAGGGAGCTGGTTTTGGTGGTGGATCAAGTAGGCAAGTGTCACACAAATTGCCATCAACATCGTTGCTGAGTGAAACTGTTATATATGGCAGAGATAATGACAAAGAAATTGTATTTAATTGGTTGTTGTCTGACACTGAGAATGATAACCATCAGTTGTCCATAATTTCTATTGTGGGTATGGGAGGCATGGGTAAGACCACTCTTGCCCAACATTTATACAATGACCAAAGGATGGAGGGTAAATTTGATATCAAAGCTTGGGTTTGTGCTTCAGATGAATTTGATGTTATTAAGGTGACAAGAGCAATTCTTGAGGAAATCACTGGATCAACTGATGACAGCACAGAGCTTAATATGCTTCAGGTAAAGCTGAAGCAAAAGTTGATGGGGAAGAGGTTTCTTCTTGTTCTGGATGACGTTTGGAACGAAGATCGTATGAAGTGGGAATCTCTGCGAGCTCCTTTTAATGGTTCTTCTCAGGGAAGCAAAATTCTGGTAACCACACGCAGTATGAAAGTTTCTTCAATCATGCGATCAAATCAGACACATCAGCTAGAGAAATTACAAGAAGAATATTGTTGGCAATTGTTCTCTAAACATGCATTCCTAGATGAAAATTCTCAATCAAATCTCGACTTTGAGGAGGTTGGTATACAAATAGTTAAAAAATGCAAAGGCTTGCCTCTGGCTTTGAAAACTATAGGAAATCTCTTATACATGAAACCGTCTTCACTGTCAAATAACCACTTAATCCCAAAAGCTTAA 1212 0.401 MALELLGGALASAFFQATFDRLASADILAYFRGRKLNEKLLKKLHIMLMSINAVVDDAELKQIRNGNVKAWLDAVKAAAFDAEDLLDEINTQLSWCKQEAESQSSASKVWNFFNANVTSFDKEIEPRMQEILDNLEFLATQKDILGLREGAGFGGGSSRQVSHKLPSTSLLSETVIYGRDNDKEIVFNWLLSDTENDNHQLSIISIVGMGGMGKTTLAQHLYNDQRMEGKFDIKAWVCASDEFDVIKVTRAILEEITGSTDDSTELNMLQVKLKQKLMGKRFLLVLDDVWNEDRMKWESLRAPFNGSSQGSKILVTTRSMKVSSIMRSNQTHQLEKLQEEYCWQLFSKHAFLDENSQSNLDFEEVGIQIVKKCKGLPLALKTIGNLLYMKPSSLSNNHLIPKA* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2429 403 PRINTS Disease resistance protein signature 203 218 - -
Lja3g2429 403 PRINTS Disease resistance protein signature 373 387 - -
Lja3g2429 403 PRINTS Disease resistance protein signature 276 290 - -
Lja3g2429 403 Gene3D - 157 336 IPR027417 -
Lja3g2429 403 Gene3D - 337 398 IPR042197 -
Lja3g2429 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 390 IPR027417 -
Lja3g2429 403 PANTHER DISEASE RESISTANCE PROTEIN RP 17 391 IPR044974 GO:0006952
Lja3g2429 403 PANTHER OS05G0414200 PROTEIN 17 391 - -
Lja3g2429 403 Pfam Rx N-terminal domain 13 103 IPR041118 -
Lja3g2429 403 CDD SIMIBI 202 288 - -
Lja3g2429 403 Gene3D - 30 129 - -
Lja3g2429 403 Pfam NB-ARC domain 181 390 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2429 Lja-Chr3 29816116 29817327 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2429 201 390 WRKY Transcription Factor Family AT5G45050 31.472 6.10e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2429 - - lja:Lj0g3v0227319.1 696.427