Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2428 ATGCACAGGCCCACCTACCAAGTCTTTTTTCAACATTCAAGTACAGATCCAAAGCAATTTATCATGCATGACCTTCTCAATGATTTAGCAAAATATGTATCTGGGGATTTTGTTTACAGGTTGGAGGATGAAGAAGCACAAAATATATCAAAAGTGACTCGTCATTTTTCATTTTTAAGAAGGATATATGAAGCTTCCAACAGATTTGATGCCTTATACAATGCCAGTAGATTTCGAACATTTCTACCATTAGGTAGGAATGCCAAACTATCTACATGGGATTATTTCTGGATGCCTGAGACGTTGGTGCATGTATTGGTTTCCATGTTTAAGTTCTTACGTGCCTTATCTTTTTCTGGTTACGCGATATGTGAGCTTCCTAACACCATAGGCAATCTTACACAGCTCCATTATCTAGACCTATCTTGGACCAACATACAAAAGCTACCACATTCAATATGTTTGCTCTATAACTTACAGACATTGAAGTTGAATGATTGTCGATTTTTGGAAGAGCTTCCCTTGAATTTGCATAAACTCACTAATTTGCGCTATCTCGATTTTAGTAGAACTAAGGTGAGAAAAATGCCAATGCATTTTGGAAAATTAAATAATCTTCAAGTATTGAGTTCGTTTTACGTTGGAAAAGGTAAGGAGTCCAATATTCAGCCGTTAAGTGTACTCAATCTTCATGGAGGCTTATCAATTTCAGAGCTGCAGAATATTGTCAATCCCTTGGATGCATTAGCAGCAAATTTGAAAAATAAAGTACACCTCGTGAAGCTTGATTTAGAGTGGAAGGAAAATGATGATGATTCACAAAAGGGAAGGGAAGTTCTTGAAAATCTGCAACCTTGCAAACACTTGAAGGAGCTGGCAGTAAGGAACTACGGTGGTACACGATTTCCATATTGGATTGGAAATAATTCATTATCCAATGTGGTGTCCTTAACACTGAGCAATTGTGAAAATTGTGTGATATTGCCTTCCTTTGGGCTGTTGTCATCTCTCAAGCAACTGTCAATTATTGGGCTCCATGGGGTAGTGGTAATTGGTGGGGAGTTTTATGGGAATGGGAGTAGCTCTTCTACTATTCCATTTGCGTCATTGGAAACCTTAGTCTTCCACAATATGAAAGAATTGGAAGAGTGGGAATGTGAAATTGTGGGGGGTGTTTTTTCCACGCCTCCAAGAGCTTTCTGTGAGCAATTGTCCCAATCTGAAAGAGCATTTGCCAGAGCAGCTTCCATCTTTGAGGAAATTAACTATTTATGA 1275 0.3835 MHRPTYQVFFQHSSTDPKQFIMHDLLNDLAKYVSGDFVYRLEDEEAQNISKVTRHFSFLRRIYEASNRFDALYNASRFRTFLPLGRNAKLSTWDYFWMPETLVHVLVSMFKFLRALSFSGYAICELPNTIGNLTQLHYLDLSWTNIQKLPHSICLLYNLQTLKLNDCRFLEELPLNLHKLTNLRYLDFSRTKVRKMPMHFGKLNNLQVLSSFYVGKGKESNIQPLSVLNLHGGLSISELQNIVNPLDALAANLKNKVHLVKLDLEWKENDDDSQKGREVLENLQPCKHLKELAVRNYGGTRFPYWIGNNSLSNVVSLTLSNCENCVILPSFGLLSSLKQLSIIGLHGVVVIGGEFYGNGSSSSTIPFASLETLVFHNMKELEEWECEIVGGVFSTPPRAFCEQLSQSERAFARAASIFEEINYL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2428 424 Gene3D Ribonuclease Inhibitor 87 396 IPR032675 -
Lja3g2428 424 SUPERFAMILY L domain-like 22 352 - -
Lja3g2428 424 PANTHER OS05G0414200 PROTEIN 8 386 - -
Lja3g2428 424 PANTHER DISEASE RESISTANCE PROTEIN RP 8 386 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2428 Lja-Chr3 29814310 29816025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2428 113 209 WRKY Transcription Factor Family AT4G12020 36.735 3.48e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2428 - - lja:Lj0g3v0227339.2 803.127