Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2370 ATGCGCCTCCTGCTTCTGGTGGCGGTGTTGGTGGAGCTCGCCACCGCGGGTCACATCTCCGAGCCCGGCGCGCTTCTCACATTCAAAGCCTCCTCCATCTCCGACGACCCAACCCACGCCCTCTCCTCATGGAACACCACCACACACCACTGCTCCTGGCACGGCGTCACTTGCGGCCCCCGCCGCCACATCACCTCCCTTAACCTCTCCTCTCTCTCCCTCTCCGGCAAACTCACCGCCGACGCCCTCTCCTCCCTCCCTTTCCTCTCCTCCCTCTCCCTCGCCGACAACCAGTTCTCCGGCCACATCCCACCCTCGCTCTCTTCCCTCACCTCCCTTCGCTTCCTCAACCTCTCCAACAACCTCTTCAACGGCACCTTCCCCTCTCACCTCTCGCGCCTCTTCAACCTCCAGGTTCTTGACCTCTACAACAACAACGTCACCGGCGATCTCCCACTCGCCGTCACCGGCATGCCCTTCCTCCGCCATTTGCATCTCGGCGGTAACTACTTCACCGGAACCATCCCGCCGGAGTACGGCAGATGGGTCCACATCGAGTACCTCGCCGTCTCCGGCAACAACCTCGTCGGCACCATCCCGCCGGAGATCGGAAACCTCACCAGCCTCCGGGAGCTTTACCTCGGCTACTACAACAACTACCAAGGCGGCATCCCTCCGGAGATCGGTAACCTCACTCAGCTTCTCAGATTCGACGCCGCTTACTGCGGCCTCTCCGGCGAGATTCCGGCAGAGCTTGGGAAGCTTCAGAAACTCGACACACTCTTCCTCCAGGTGAATGTCCTCTCCGGTTCACTCACGCCGGAGCTCGGGCACCTCAAGAGCCTCAAATCCATGGATTTATCCAACAACATGCTCTCCGGCCAGGTTCCGGCGAGCTTCGCTGAGCTGAAGAATCTTACCCTGTTGAACCTCTTCAGGAACAGGCTCCACGGAGCGATTCCTGAGTTCGTCGGAGAGATGCCGGCGCTGGAGGTGCTGCAACTCTGGGAGAACAACTTCACCGGAAGCATTCCTCAGAGTTTGGGGAAGAATGGGAAGCTCACCCTCGTTGATCTTTCTTCCAACAAGTTGACAGGGACTCTTCCACCTCACATGTGTTCCGGGAATCGTCTTCAGACCCTCATAGCTCTTGGCAACTTTCTCTTTGGTCCCATTCCTGAATCGCTTGGAAAGTGTGAATCTCTGACCAGGATTCGAATGGGTCAGAATTTTCTGAATGGGTCTATCCCAAAAGGGCTATTCGGGCTTCCAAAACTCACACAGGTTGAGTTTCAGGACAATCTTCTCTCTGGGGAGTTTCCTGAAACTGGTTCTGTTTCTCACAACATTGGTCAGATTACCCTCTCCAACAACAAGCTTTCTGGTCCCTTACCATCCACCATTGGCAACTTCACCAGCATGCAGAAGCTTCTCCTTGATGGGAACAAGTTCTCTGGTAGAATCCCACCTCAGATTGGGAAGCTTCAACAGCTTTCCAAGATGGATTTCAGCCACAACAAGTTTTCAGGTCCTATTGCGCCTGAGATTAGTCAATGCAAGTTGTTAACCTTTGTTGATCTCAGCCGCAATGAGCTCTCTGGTGAGGTTCCGAAAGAGATCACCGGCATGCGGATTTTGAACTACTTGAACCTTTCAAGGAATCACCTAGTTGGTGCCATCCCATCTTCTGTTGCAGCTATGCAGAGCTTGACTTCTGTTGATTTTTCATACAACAATCTCTCTGGTTTGGTTCGTGGTACTGGCCAGTTCAGCTACTTCAACTATACCTCCTTCTTGGGAAACCCTGAATTATGTGGTCCTTATTTGGGTCCTTGCAAAGATGGGGTTATCAATGGCCCTCGCCAACCTCATGTCAAAGGTCCACTTTCACCTTCTTTGAAGCTTCTGCTAGTTATTGGGTTGCTGGTGTGCTCGATTGCTTTCGCGGTTGCGGCAATACTCAAAGCACGGTCTCTGAAGAAGGCGAGTGAAGCTCGTGCATGGAAATTGACTGCATTCCAACGCTTAGACTTCACTGTGGATGATGTTTTGGATTCCTTGAAGGAGGACAACATTATAGGGAAGGGAGGTGCAGGCATTGTTTACAAGGGTTCAATGCCAAATGGGGGTCATGTTGCTGTTAAGAGACTACCAGCTATGAGCAGAGGCTCTTCCCATGATCATGGGTTCAATGCCGAGATTCAGACATTGGGGCAAATTCGACACAGGCACATTGTTAGGTTATTGGGTTTCTGTTCAAACCATGAGACTAATCTTTTGGTGTATGAGTACATGCCTAATGGGAGTTTAGGTGAGGTTCTTCATGGTAAGAAAGGGGGTCATTTTCTTTGGGACACCAGGTACAAAATCGCTGTGGAGGCTGCAAAGGGACTTTGCTATTTGCATCATGATTGTTCACCACTGATTGTTCACCGAGATGTGAAATCGAACAATATCCTTCTTGATTCCAATTTTGAAGCCCATGTTGCTGATTTTGGGCTTGCTAAGTTCCTTCAAGATTCTGGAACATCTGAATGCATGTCTGCTATTGCTGGTTCTTATGGATACATAGCTCCAGAGTATGCCTACACATTGAAAGTGGATGAGAAAAGTGACGTGTACAGCTTCGGGGTGGTTCTTTTGGAGCTCGTAACAGGGAGGAAACCAGTTGGGGAATTTGGCGATGGAGTGGACATTGTGCAATGGGTGAGAAAAATGACAGACTCAAACAAAGAAGGGGTGCTAAAAGTTCTTGATCCTAGGCTTCCCTCAGTTCCACTCCATGAGGTCATGCATGTATTCTATGTAGCAATGCTGTGTGTTGAAGAACAAGCAGTGGAGAGGCCCACCATGCGCGAAGTCGTTCAAATCCTCACTGAGCTTCCACAGCCACCTGATTCAAAACATGGAGGAGACTCAACCATCACTGAATCCTCTTTGTCACCATCCAACAGTTTAGAGTCTCCAACCACAGCATCTAAAGAAGCTAAAGATCTTCTTAGCATATGA 3009 0.5085 MRLLLLVAVLVELATAGHISEPGALLTFKASSISDDPTHALSSWNTTTHHCSWHGVTCGPRRHITSLNLSSLSLSGKLTADALSSLPFLSSLSLADNQFSGHIPPSLSSLTSLRFLNLSNNLFNGTFPSHLSRLFNLQVLDLYNNNVTGDLPLAVTGMPFLRHLHLGGNYFTGTIPPEYGRWVHIEYLAVSGNNLVGTIPPEIGNLTSLRELYLGYYNNYQGGIPPEIGNLTQLLRFDAAYCGLSGEIPAELGKLQKLDTLFLQVNVLSGSLTPELGHLKSLKSMDLSNNMLSGQVPASFAELKNLTLLNLFRNRLHGAIPEFVGEMPALEVLQLWENNFTGSIPQSLGKNGKLTLVDLSSNKLTGTLPPHMCSGNRLQTLIALGNFLFGPIPESLGKCESLTRIRMGQNFLNGSIPKGLFGLPKLTQVEFQDNLLSGEFPETGSVSHNIGQITLSNNKLSGPLPSTIGNFTSMQKLLLDGNKFSGRIPPQIGKLQQLSKMDFSHNKFSGPIAPEISQCKLLTFVDLSRNELSGEVPKEITGMRILNYLNLSRNHLVGAIPSSVAAMQSLTSVDFSYNNLSGLVRGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVINGPRQPHVKGPLSPSLKLLLVIGLLVCSIAFAVAAILKARSLKKASEARAWKLTAFQRLDFTVDDVLDSLKEDNIIGKGGAGIVYKGSMPNGGHVAVKRLPAMSRGSSHDHGFNAEIQTLGQIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHFLWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPQPPDSKHGGDSTITESSLSPSNSLESPTTASKEAKDLLSI* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2370 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Lja3g2370 1002 Gene3D Phosphorylase Kinase; domain 1 652 764 - -
Lja3g2370 1002 MobiDBLite consensus disorder prediction 969 1002 - -
Lja3g2370 1002 Pfam Leucine rich repeat N-terminal domain 22 58 IPR013210 -
Lja3g2370 1002 Gene3D Ribonuclease Inhibitor 19 180 IPR032675 -
Lja3g2370 1002 MobiDBLite consensus disorder prediction 959 1002 - -
Lja3g2370 1002 SMART serkin_6 687 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2370 1002 SMART LRR_typ_2 327 351 IPR003591 -
Lja3g2370 1002 SMART LRR_typ_2 471 495 IPR003591 -
Lja3g2370 1002 SMART LRR_typ_2 279 302 IPR003591 -
Lja3g2370 1002 SMART LRR_typ_2 110 134 IPR003591 -
Lja3g2370 1002 SMART LRR_typ_2 158 182 IPR003591 -
Lja3g2370 1002 SMART LRR_typ_2 352 375 IPR003591 -
Lja3g2370 1002 SMART LRR_typ_2 567 590 IPR003591 -
Lja3g2370 1002 SMART LRR_typ_2 86 109 IPR003591 -
Lja3g2370 1002 Gene3D Transferase(Phosphotransferase) domain 1 765 974 - -
Lja3g2370 1002 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 19 998 - -
Lja3g2370 1002 Pfam Leucine Rich repeats (2 copies) 136 175 IPR025875 -
Lja3g2370 1002 ProSiteProfiles Protein kinase domain profile. 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2370 1002 SUPERFAMILY RNI-like 66 389 - -
Lja3g2370 1002 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 19 998 - -
Lja3g2370 1002 Pfam Protein tyrosine and serine/threonine kinase 689 958 IPR001245 GO:0004672|GO:0006468
Lja3g2370 1002 Gene3D Ribonuclease Inhibitor 181 255 IPR032675 -
Lja3g2370 1002 Gene3D Ribonuclease Inhibitor 256 325 IPR032675 -
Lja3g2370 1002 Gene3D Ribonuclease Inhibitor 326 616 IPR032675 -
Lja3g2370 1002 SUPERFAMILY L domain-like 352 612 - -
Lja3g2370 1002 SUPERFAMILY Protein kinase-like (PK-like) 680 959 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2370 Lja-Chr3 28819457 28823691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2370 19 989 Receptor kinase-like Gene Family AT5G65700 80.020 0.0 1565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja3g2370 PK_Tyr_Ser-Thr 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2370 - - gmx:100499646 1659.43