Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2362 ATGTATACCTCTGCCAGTACATGTGAGATAGTGGAATCCAGGGAAGAGATAATTTCTGAGTTCAATATGGATGATAAACCAGAGAGTAGCTGTTCTCACAGATCAGGAAAGAAGTATTTAATTGAGGATGATATTAATCGTCTTTTCCATGCTATTGAGATTAAAACTTCATCTAGAGGTTTTAATACATCAAGATCACAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTAAGTCCATCTCAGGCATCAGGAATTGGCATCTCGGAGACTGTAAGCTTGAAGCAGGCACTTAGAGGGTTGTGCATCTCTCAGGCATCGGAAATGGCTGCGTTGAAGAGGCTCTCAAAGCCATGCAGTTCCTCAAGAGTATCAGAGGCTGGCACCATCAAAAAGTTGTACACAGCAGTTGTAGATGAGGGGAAAGGGAGCTTGGTGCAAATCTCCCTAGTGCCAGATATATCCTCACCTTCTGATAAATTGCCCGGTGTAGCGTTACCAGGTTCAAGTGCTAATCACTCTATTCCTTTTGTTGATGCGACAAATGCAAACGAAATGACAACCAGGTTTGCATCCCGAGATCAGATTGTTCCTCTTCCACCTGAGGTTGAGGGTGAAAAGCCAACTATTGGACCAAAACTTGCAAACTTGTCACCAGTTACTTCGGGAGCCCAGGAAGTGCCACAGGTCAGAATAGATACTGCTTCCTTCAGTAAAGCTTCTATCAGTTGTTCAATGTCTGATAAGGGCCATGAAGCAAAATTACCTTCAGTGTCTTGCCCACCTAGCTCTATTACTGGTAATAGAGTGGACAAACCCTCCGGCAGTATTACATGTTTTGCAAGGCCATTATTCAATAACATGAACTTCTTCAAGAAAAAAGTAAAGCATGATCTTTGTTCTGCCTCAAGCTGCTCTACTTCATCTATGAGAAATGATTTGGGTTATAGTACCACTAATATGGACAAGGGGATTGGCAATTCTGATCTGAAGCATGAAATGAGAGAAAACGATAAACCGTCTCCCAGCAGTTCAAATCACAGCATCGAAGTTAACTCGATTAATGTTAGTACGGATTCAAACAAACCTGATATGAGTTCGAATTGCAGTAAAAGAACTAAGTTTATAGTGATGAAAGTTGATGAGAAATCAAGATCAAAGGAAAAGGGTGAGTTCTCTCAAAGCTCAAAAAGTAGTATTGGTGAGTATAGCAGTAGCACAAGCGTCAGTGAGGAGAGCAATCTAAGTGGTTCCAGTCGCGGTGGACATAGACCTCACATGTCAAAACACTTGAGATGGGAAGCTGTTCGTGCTGTTCAACGGAAGCATGGTAATTTACATTTAAGGCACTTCAAGCTGTTAAGGAGGCTTGGTAGTGGGGACATTGGAAATGTTTATCTTGCAGAACTAATTGGTACAAGCTGCCTTTTTGCACTGAAAGTGATGGACAACGAATTTTTGGCAAGCCGTAACAAAATGTTCAGGGTCCAAACTGAAAGAGAGATCCTTCAAATACTGGATCATCCATTCCTTCCTACACTTTATTCGCACATCACAACAGATAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCAGGCGGGGATCTGCATGTGCTGCGACAGAGGCAACCATATAAGAGTTTCTCGGAACAAGCAGCTAGGTTTTATGTTGCTGAAGTTCTTCTTGCCCTTGAGTATTTGCACATGCTGGGAGTTGTGTATCGAGATTTAAAGCCAGAAAATATCCTAGTACGCGAAGATGGCCACATTATGCTGACAGATTTTGACTTGTCACTCAGATGTTCTGTCAAACCAATGTTAGTCAAGTCATCTTCACTTGACACAGATGCAACAAAGAAGACGTCCAGTCCCTGTTCCGAGGCTAGCTGCATACACCCTTTCTGTCTCCAACCAGATTGGCAGGTTTCCTGCTTTACTCCTATTCTATTATCTACCGGAGCAAAATCTCGAAAGATGAAGGCTGACATAGGTGCTCAGGTCGGTCCGCTGCCACAGCTTGTGGTGGAGCCTACCGGTGCACGGTCTAACTCCTTTGTTGGAACCTATGAGTATCTTGCTCCAGAGATTATCAAAGGTGAGGGTCATGGAAATGCTGTAGATTGGTGGACTTTTGGTATATTTTTGTTTGAGCTTTTATATGGTAAGACTCCCTTCAAGGGCCTGGCAAATGAGGATACATTAGCCAATGTTGTATCACAGAGCCTTAAGTTCCCAAGTGCTCCTATAGTCAGTTTTCATGCAAGAGATTTGATCAGAGGATTATTGATAAAGGATCCTGAAAATCGGTTAGGTTCTGTAAAAGGTGCTGCTGAAATAAAACAGCATCCCTTCTTTGAAGGCCTCAACTGGGCTCTAATACGGTGTGCGGCACCTCCGGAGCTTCCCAAGTTTCATGATTTTGGAACTAGTGCTCCTCCTATAGCTACTGAAGATGGTCAAGAGTTTGAGCTGTTTTAG 2475 0.4279 MYTSASTCEIVESREEIISEFNMDDKPESSCSHRSGKKYLIEDDINRLFHAIEIKTSSRGFNTSRSQKSALKRPIKVSPSQASGIGISETVSLKQALRGLCISQASEMAALKRLSKPCSSSRVSEAGTIKKLYTAVVDEGKGSLVQISLVPDISSPSDKLPGVALPGSSANHSIPFVDATNANEMTTRFASRDQIVPLPPEVEGEKPTIGPKLANLSPVTSGAQEVPQVRIDTASFSKASISCSMSDKGHEAKLPSVSCPPSSITGNRVDKPSGSITCFARPLFNNMNFFKKKVKHDLCSASSCSTSSMRNDLGYSTTNMDKGIGNSDLKHEMRENDKPSPSSSNHSIEVNSINVSTDSNKPDMSSNCSKRTKFIVMKVDEKSRSKEKGEFSQSSKSSIGEYSSSTSVSEESNLSGSSRGGHRPHMSKHLRWEAVRAVQRKHGNLHLRHFKLLRRLGSGDIGNVYLAELIGTSCLFALKVMDNEFLASRNKMFRVQTEREILQILDHPFLPTLYSHITTDKLSCLVMEYCPGGDLHVLRQRQPYKSFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVKPMLVKSSSLDTDATKKTSSPCSEASCIHPFCLQPDWQVSCFTPILLSTGAKSRKMKADIGAQVGPLPQLVVEPTGARSNSFVGTYEYLAPEIIKGEGHGNAVDWWTFGIFLFELLYGKTPFKGLANEDTLANVVSQSLKFPSAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFHDFGTSAPPIATEDGQEFELF* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2362 824 SUPERFAMILY Protein kinase-like (PK-like) 426 803 IPR011009 -
Lja3g2362 824 MobiDBLite consensus disorder prediction 247 271 - -
Lja3g2362 824 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 1 821 - -
Lja3g2362 824 MobiDBLite consensus disorder prediction 392 420 - -
Lja3g2362 824 MobiDBLite consensus disorder prediction 198 220 - -
Lja3g2362 824 MobiDBLite consensus disorder prediction 381 426 - -
Lja3g2362 824 MobiDBLite consensus disorder prediction 340 367 - -
Lja3g2362 824 CDD STKc_phototropin_like 448 807 - -
Lja3g2362 824 Pfam Protein kinase domain 681 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2362 824 Pfam Protein kinase domain 451 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2362 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 571 583 IPR008271 GO:0004672|GO:0006468
Lja3g2362 824 Gene3D Transferase(Phosphotransferase) domain 1 679 802 - -
Lja3g2362 824 ProSiteProfiles Protein kinase domain profile. 450 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2362 824 PANTHER FLIPPASE KINASE 1-RELATED 1 821 - -
Lja3g2362 824 MobiDBLite consensus disorder prediction 302 367 - -
Lja3g2362 824 Gene3D Transferase(Phosphotransferase) domain 1 530 599 - -
Lja3g2362 824 SMART serkin_6 450 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2362 824 MobiDBLite consensus disorder prediction 302 324 - -
Lja3g2362 824 MobiDBLite consensus disorder prediction 325 339 - -
Lja3g2362 824 Gene3D Phosphorylase Kinase; domain 1 448 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2362 Lja-Chr3 28704171 28708887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2362 352 824 AGC Kinase Gene Family AT3G52890 62.749 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lja3g2362 Pkinase 3.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2362 - - gmx:100784955 1268.45