Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2325 ATGGCTGTGATTGAGATTCAAGCCTATATGCAACTTTTCTTCATTTTGCTACTCTCCACCATTGTGGTTCAAGCCATACTAACCAGGAAAAAGAACAAGGGCCATCACCCCCCGAGCCCTCATATATTACCTATTGTTGGACACCTTCACCTTATTTCTAAGCTACCTCACCAAAGTTTTCACAAGCTCTTAACTAGTTATGGACCCATAGTGAAACTTTTCCTAGGATCAGTTCCTTGTGTGGTAGCTTCCACTCCAGAAATTGCCAAGGAGTTTCTCAAAACCCATGAATCTTGCTTCTCCAACCGTGTTAGAAATCCAGCCATTCACTACTTATCATATGGCTCTAAGGGCTTCTTATTTGCACCATATGGAGGGTATTGGAAGTTCATGAAAAAGGTATGCATGTCCGAGCTTCTTGGTAGCAAAACCCTTCATCAGCACCTTCCCTTGAGGCAACAAGAGACTCTGAGGTTTCTTAGAGTTTTAAAAAATAAAGGGGAGGCCGGTGCGACCGTCGATGTCGGTAGCGAGCTCTTGACTCTCACCAATTGTGTTATAACAAGAATGACTATGAGCATAGTGTGTTCTGGAAATGATGGCAAAGATGTGGATGATATAAGGAAGATGGTGACTGACACTGCAGAACTTGTAGGGAAATTTCATGTGTTAGACTTTTTTCGATTTTTTAAGAATTGGGATTTTCATGGAAGGTATAAAAAGCTCAAGGAGATTCGAGACAAGTTCGACACCATAATGGAGAGGGTGATAAAGGAGCATGAAGTGGAAAGGAAGGAAAGAGGTGATGATGGTGCTCAAATTAGGGATCTGCTTGATATTTTGTTGGAGATACATGAGGATGAGAGCACCAAGATAAAATTGAGCAGAGACAATATCAAGGCTTTCATCATGGACATATTTATGGCCGGAACTGACTCATCTGCCGTAACTATCGAGTGGGCTATGGCAGAGTTAATCAACCACCCGCAAGTGATGGAGAGAGCAAGACAAGAGATCGATTCAGTAACGGGGAATAAAAGATTAGTACAAGAGTCAGATCTTCTCAACCTTCCTTATATTCGAGCTATAGTCAAAGAATCACTAAGAATCCACCCCACATTGCCACTTATAGGCAGAAGATCAACAGAAAGTTGCAATGTTGGTGGTTATGATATCCCAGCAAAGTGTCCATTGTTTGTTAACTTGTGGTCTATGGGAAGGGACCCCAATGTGTGGGAGAACCCACTTGAGTTCAAGCCTGAGAGATTTATGAGTGAAGAGATGAAAAAATTTGATGTGAGGGGACAGAATTTCAAACTCATGCCATTCGGGACCGGGAGGAGGGTGTGTCCTGGAGCCTCACTAGCACTTCTGGTTGTGCCAACTAATCTTGCTGCCATGATTCAATGTTTTGAATGGAAGGTACTTCATGGGGAAAGGAATGGGATTGTTAACATGGAAGAGAAACCAGCCATTTCTCTTCCCAGAGCTCATCCTTTGATTTGTGCCCTCATGCCAAGGAGTGTATCCAAGATTTTAGTTCAAGAGAGTATCGTTTAG 1560 0.4263 MAVIEIQAYMQLFFILLLSTIVVQAILTRKKNKGHHPPSPHILPIVGHLHLISKLPHQSFHKLLTSYGPIVKLFLGSVPCVVASTPEIAKEFLKTHESCFSNRVRNPAIHYLSYGSKGFLFAPYGGYWKFMKKVCMSELLGSKTLHQHLPLRQQETLRFLRVLKNKGEAGATVDVGSELLTLTNCVITRMTMSIVCSGNDGKDVDDIRKMVTDTAELVGKFHVLDFFRFFKNWDFHGRYKKLKEIRDKFDTIMERVIKEHEVERKERGDDGAQIRDLLDILLEIHEDESTKIKLSRDNIKAFIMDIFMAGTDSSAVTIEWAMAELINHPQVMERARQEIDSVTGNKRLVQESDLLNLPYIRAIVKESLRIHPTLPLIGRRSTESCNVGGYDIPAKCPLFVNLWSMGRDPNVWENPLEFKPERFMSEEMKKFDVRGQNFKLMPFGTGRRVCPGASLALLVVPTNLAAMIQCFEWKVLHGERNGIVNMEEKPAISLPRAHPLICALMPRSVSKILVQESIV* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2325 519 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Lja3g2325 519 Gene3D Cytochrome P450 28 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 Pfam Cytochrome P450 37 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 SUPERFAMILY Cytochrome P450 37 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2325 519 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 507 - -
Lja3g2325 519 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2325 Lja-Chr3 28109624 28117400 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2325 3 511 Cytochrome P450 AT5G06900 45.988 3.66e-166 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2325 K24188 - gmx:100805931 690.263