Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2323 ATGGCTGTGACTGAGATTCAAGCCTATATGAAAAAGAACAAGGGCCATCACCCCCCGAGCCCTCATATATTACCTATTGTTGGACACCTTCGCCTTATTTCTAAGCTACCTCACCAAAGTTTTCACAAGCTCTTAACTAGTTATGGACCCATAGTGAAACTTTTCCTAGGATCAGTTCCTTGTGTGGTAGCTTCCACTCCAGAAATTGCCAAGGAGTTTCTCAAAACCCATGAATCTTGCTTCTCCAACCGTGTTAGAAATCCAGCCATTCACTACTTATCATATGGCTCTAAGGGCTTCTTATTTGCACCATATGGAGGGTATTGGAAGTTCATGAAAAAGGTATGCATGTCTGAGCTTCTTGGTAGCAAAACCCTTCATCAGCACCTTCCCTTGAGGCAACAAGAGACTCTGAGGTTTCTTAAAGTTTTAAAAAATAAAGGGGAGGCCGGTGCGACCGTCGATGTCGGTAGCGAGCTCTTGACTCTCACCAATTGTGTTATAACAAGAATGACTATGAGCATAGTGTGTTCTGGAAATGATGGCAAAGATGTGGATGATATAAGGAAGATGGTGACTGACACTGCAGAACTTGTAGGGAAATTTCATGTGTTAGACTTTTTTCGATTTTTTAAGAATTGGGATTTTCATGGAAGGTATAAAAAGCTCAAGGAGATTCGGGACAAGTTCGACACCATAATGGAGAGGGTGATAAAGGAGCATGAAGTGGAAAGGAAGGAAAGAGGTGATGATGGTGCTCAAATTAGGGATCTGCTTGATATTTTGTTGGAGATACATGAGGATGAGAGCACCAAGATAAAATTGAGCAGAGACAATATCAAGGCTTTCATCATGGACATATTTATGGCCGGAACTGACTCATCTGCCGTAACTATCGAGTGGGCTATGGCAGAGTTAATCAACCACCCGCAAGTGATGGAGAGAGCAAGACAAGAGATCGATTCAGTAACCGGGAATAACAGATTAGTACAAGAGTCAGATCTTCCCAACCTTCCTTATATTCGAGCTATAGTCAAAGAATCACTAAGAATCCACCCCACATTGCCACTTATAGGCAGAAGATCAACAGAAAGTTGCAATGTTGGTGGTTATGATATCCCAGCAAAGTGTCCATTGTTTGTTAACTTGTGGTCTATGGGAAGGGACCCCAATGTGTGGGAGAACCCACTTGAGTTCAAGCCTGAGAGATTTATGAGTGAAGAGATGAAACAATTTGATGTGAGGGGACAGAATTTCAAACACATGCCATTCGGGACTGGGAGAAGGGTGTGTCCTGGAGCCTCACTAGCACTTCTGGCTGTACTTCATGGGGAAAGGAATGAGATTGTTAACATGGAAGAGAAACCAGCCATTTCTCTTCCCAGAGCTCATCCTTTGATTTGTGTCATCATGCCAAGGAGTGTATCCAAGATTTTAGTTCAAGAGAGCATCGTTTAG 1458 0.428 MAVTEIQAYMKKNKGHHPPSPHILPIVGHLRLISKLPHQSFHKLLTSYGPIVKLFLGSVPCVVASTPEIAKEFLKTHESCFSNRVRNPAIHYLSYGSKGFLFAPYGGYWKFMKKVCMSELLGSKTLHQHLPLRQQETLRFLKVLKNKGEAGATVDVGSELLTLTNCVITRMTMSIVCSGNDGKDVDDIRKMVTDTAELVGKFHVLDFFRFFKNWDFHGRYKKLKEIRDKFDTIMERVIKEHEVERKERGDDGAQIRDLLDILLEIHEDESTKIKLSRDNIKAFIMDIFMAGTDSSAVTIEWAMAELINHPQVMERARQEIDSVTGNNRLVQESDLPNLPYIRAIVKESLRIHPTLPLIGRRSTESCNVGGYDIPAKCPLFVNLWSMGRDPNVWENPLEFKPERFMSEEMKQFDVRGQNFKHMPFGTGRRVCPGASLALLAVLHGERNEIVNMEEKPAISLPRAHPLICVIMPRSVSKILVQESIV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2323 485 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 PRINTS E-class P450 group I signature 45 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 PRINTS E-class P450 group I signature 69 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 Pfam Cytochrome P450 18 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 473 - -
Lja3g2323 485 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 473 - -
Lja3g2323 485 Gene3D Cytochrome P450 9 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Lja3g2323 485 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2323 485 SUPERFAMILY Cytochrome P450 18 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2323 Lja-Chr3 28033997 28049277 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2323 18 477 Cytochrome P450 AT5G06900 44.798 3.17e-148 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2323 K24188 - gmx:100805931 625.55