Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2315 ATGAAGTTGCAGGCGCATATGACGGGGCAGATATCGGGACAGGTACCCAATCAAGCAGGGTCTCAGATGCCTGGACTGACCCAAATGAATGGGAATGCCCTCCCTCCACAGATGCCACCTTTAGGTGGTATGCAGCGATCAGCGATTAATATGGACCCTGAATTTCAAAGAGCACGCGCGTTTATTCAAGAGAAGATTTTTGAAACGTTATTGCAACGACATCAGCAGCCAGTTTCAGAAGTACAGAGAAGGAAGCTTAAGGATCTTGCAAAACGCCTGGAGGAGGGCATGGTAAAAGCTGCTCTATCTAAGGAGGACTACATGAACTTGGATACACTAGAGAGTCGCTTATCTAATTTGATCAGAAGAGCGTCTATGAATAATCACAACCAACAACAATATCAGCAGCATGTTAGCTCTTCTCCAATCGGTACAATGATACCAACCCCTGGTATGTCGCACGTTCCAAATTCAAGCATGGTGGTTTCGTCTACAATGGATGCCTCTGTGATTTCTGCCAGCGGGGGTAATAGCATGGCATCGACATCTTTCAATAGTGTAAATATGTTACCAGCTGGTGGCATGCTTGGCAGCTCCTTAAATAGATCTGATGGTTTGTCTAATGGATATCAGCAATCATCTACCAACTTTTCTGTTGGCTCAGGGGGAAACATGTCAACGATGGGGGTGCAGCGGATTGCAAGTCAGATGATTCCCACTCCGGGATTTACAGTCAGCAGTAATCACTCTCACATGAATATAGATTCTTCTGCTAATGGCAGTTCCTATTCCAGTGTGGAGTCTACTATGGTATCACAGTCACAAGTGCAGCAGCAAAAGCAGCATGTTGGTGGGCAAAGTCATGTATTGCAGAACCTTGGAAGCAGCCAAATGAGTAGTGGAATGAGATCTGGTTTGATACAGAAACCATTTGCAAACTCAAATGGTTCTATAAATAGTGGGCTAGGTTTGATTGGAAACAATATTCAACTTGCAAATGAACCTGTCACTTCGGATGGCTATGCCTCAACTTACGCTAATTCCCCTAAACACTTACAGCAGCATTTTGATCACAATCCGAAACCACTAGTGCAGGGTGATGGGTATGGATTGAATAATATTGACACTTTCGCTTCTGGAAGCTTTTATGCATCTGGGACATCCTCTGGGTCTATGATGAACACTCAGAACACAAATCCAGTAAAATTGCCGTCAATACAAAAAAATAGCTCATTGATTAGTGGTCACACAAATTTGCATGGTATGCAGCAGGCTGCACATATGAAGTCTCAAACAATTAATCAGTTGGAAAAGTTGAATTTTCAGTCTTCATTGACTTCAAGAGATGCTCTTATGCATTCTCAACAGCAGTATCAACAAAGGCCCCAGCAATTTCAACAGCCTGAGCACTATGCGCAGCAACAATTTCAATTGAAGCTACAGAGTCAACAGCCTCAGCATTTGGTCAACAATGATGCTTTCAGTCAGTCTCAATTGTCTTCCAATCTAGAAAACCAAGTTAAGTCTGAGCTAGGAATTGAACACCATAAAGAAGTGCTCAATTCTCATGTGTCTGAACAGTTCCATATGTCTGAGATGCAGAGTCAGTTCCAGCCGAACTCATCCGAAGACTGCTCTAGGAATGCTCAATATCTTACATTTCCATCTGGTCAGCATGATTTAGCATCATCAACACCTCAAAATTCGCAACAAATGTTACATCCTCATCAATTGGTTGCAGAGTCTCAAAATAATTTAAGCTGTGTAACAGTTGGGGCCCAATCCAAAGCGGTAGCTCTAAACCAATGGCCTCAATCACAAGATGGTGACCGCATGCCTGACAATAATTCACATGACCAGAATCTCCACATGGACTTTCATCAAAGAATATCGGTGCAGGATGAAGCTCAGTGCAATAATTTATCATCAGATGTTTCCAATATTGGTCAAGCTGTTGCTTCTAAAGGCTCAACTGAGGTGCTAGACTCAGGCAGTACTGTCAAAAAGGCGCACAGGAATCAACAGAGATGGCTTTTATTTCTACTTCATGCTCGTCGATGTTCTGCTCCTGAAGGGCGATGCCAAGAACGCTTTTGTTCTATGGCGCAAAAGTTATGTAAGCACATAGAGGGATGTACCCTGCGACACTGTCCATATCCTCGTTGTCACCATACCAGGGTATTGCTTCATCATTTCATAAACTGCAAGGATCCTCATTGCCCTGTTTGTGTTTTTGTAAGAAACTATCGACGTGCATTTCAATTCAAGCCTCAGATTCAGCCGGAACGTGGATCAAGTTTGCCAAGCACAGTGAATGGCTCCTGTAAATCTTACAATATGATACCTACATCACCTGGATTGATCTCAAAGCCTCCATCGATTATTGAAACTGCAGAAGACATGCACCCATCTCTAAAACGCATAAAGATTGAGCATAACACCCAGTCCATCAATCCTGAAAATGAGAATTCTGCTTCTTCTGTTCCTGCAAATTTTGAATCCCTTGTTTCCAGGGATGCTCAGTTCCAAGCCTATCCCAATACTGAGAAGAGTGTCTCAATTAAACCTGAGCTTACAGAAATTAAGGCGGAAGTTCCGGCACATTTGGCGCATGGAAAGCTGAGCAAGATGAAGATGGATGATAATAATGTGAACGAAAAAAGGCCTGATTGTGAACCTGTCAAATATGATGAACCTGGTAATTTAGCTAGGCAAGAGAGTATAAAATCTGAGAAAGAAGTTGGACATGATAAGCAAGAAAATGTGATGCAGCAATCTGAAAATGCAGCTGGAACCAAGTCGGGTAAGCCAAAAATAAAGGGGGTCTCATTAACTGAATTATTTACTCCGGAGCAAGTCAGGGACCATATCACTGGCCTCAGGCAATGGGTTGGCCAAAGCAAATCAAAGGCAGAGAAGAATGCAGCGATGGAGCACTCTATGAGTGAGAATTCCTGTCAACTATGTGCTGTAGAGAAGCTTACTTTTGAACCGCCACCTATTTATTGCACAACTTGTGGGGTTCGAATTAAACGAAATAATATGTATTATACCATGGGTACTGGTGACACAAGGCATTATTTTTGTATCCCATGCTATAATGATACTCGTTCAGAGAACCTCATGGTTGATGGGACTCCCATTCCTAAGTCAAGATTGGAAAAGAAGAAGAACGATGAGGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACATCAAATTTGTGCCTTATTTAATGGTAGAAGAAATGATGGTGGGCAAGCTGAATACACTTGCCCTAACTGTTATCTTGAAGAGGTAGAAAGAGGAGAGCGCAAGCCCTTACCCCAAAATGCTGTTCTTGGAGCCAAGGATTTGCCGAGAACGATTCTCAGTGACCATATAGAGCAGCGATTGGCTAAACGGCTAAAGCAAGAGAGAATGGAGAGGGCAAGGGTTCAAGGGAAAAGTTATGAAGAGGTTCCTGGAGCTGACTTTCTTGTCATCAGAGTGGTTTCATCTGTTGACAAGAAGTTAGAAGTGAAGCAGCGGTTTTTGGAGATTTTTCAGGAAGAAAATTACCCAACTGAATTCCCATATAAATCCAAAGTAGTTTTGCTTTTTCAAAAGATTGAAGGTGTGGAAGTATGCCTATTTGGCATGTATGTTCAAGAATTTGGAGCTGAAGCTCAATTTCCCAATCAGCGCCGGGTGTATCTTTCATATTTGGACTCTGTGAAGTATTTCAGACCTGAGGTTAAAGCAGTGACTGGAGAGGCACTTCGAACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGCAAGTTACGTGGTTTCACAAGCTGCTATATATGGGCTTGTCCTCCATTAAAGGGTGAAGATTATATTTTATATTGCCATCCAGAAATTCAGAAAACACCAAAATCTGATAAGCTTCGTGAATGGTATCTATGCATGCTAAGAAAAGCTGCTAAGGAGGGTATTGTGGCCGATATCACAAACTTGTTCGATCATTTCTTTGTATCTAATGGTGAAAGCAGAGCTAAGGTTACTGCTGCAAGACTGCCATATTTTGATGGCGACTACTGGCCTGGAGCTGCAGAGGATTTGATTTATCAGCTTCGCCAAGAGGAAGATGGAAGAAAACAAAATAAAAAAGGAACAACTAAAAAGACTATAACAAAAAGGGCTTTAAAAGCATCTGGTCAGTCAGATCTTTCAGGAAATGCATCAAAAGATCTGCTCCTCATGCACAAACTTGGTGAAACCATTAGCCCGATGAAGGAGGATTTTATTATGGTTCATTTGCAGCATGCATGCAGCCACTGCTGTATTCTAATGGTGTCTGGCAACCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAGGTGTTACGAAGTAGAGCTAAAGCGTGAAGAGAGAGAAAGACATCCTATTAATCAGAGGGAGAAACATGCTCTTTATCCGATCGAAATTACTGAGGTACCGTCCGATACAAAGGACAAAGATGATATTCTTGAGAGTGAATTCTTCGACACCAGACAGGCATTCCTGAGTCTTTGCCAGGGGAATCATTACCAGTATGATACGCTAAGGCGGGCCAAACATTCTTCTATGATGGTCCTCTATCATCTTCATAATCCAACTGCTCCTGCATTTGTGACAACTTGTAATATATGCTATCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCTGAGTATGATGTATGCAATGCTTGTTATCAAAAGGGTGGCATTGATCATCCTCATAAGTTGACAAATCATCCGTCAATTGCGGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGATGCGAGTATCACAGCTACGGAAAATGCTTGATCTCCTTGTGCATGCGTCCCAATGCCGTTCGGCACATTGCCAATATCCAAACTGTCGCAAGGTGAAGGGGCTCTTCCGCCACGGGATGCACTGCAAAACGCGTGCTTCTGGAGGTTGCGTCCTCTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGTGCTTGCAAAGAATCTGAATGCCATGTACCGCGATGCAGAGATTTAAAAGAACATTTAAGGAGGTTACAGCAACAGTCTGATTCACGGCGTAGAGCTGCTGTAATGGAAATGATGAGGCAGAGAGCTGCTGAATTCGGATTAGTCTCAGAGTTCTTACAAATATTTGTGGGGGGAGGTTGGTTGGTGTTTAGTTTGCTCTTTTATAGATTCACTGCATTTTGTAGAATCTTTTTATTTAAAGGTGAAAGTAAATAA 5304 0.4236 MKLQAHMTGQISGQVPNQAGSQMPGLTQMNGNALPPQMPPLGGMQRSAINMDPEFQRARAFIQEKIFETLLQRHQQPVSEVQRRKLKDLAKRLEEGMVKAALSKEDYMNLDTLESRLSNLIRRASMNNHNQQQYQQHVSSSPIGTMIPTPGMSHVPNSSMVVSSTMDASVISASGGNSMASTSFNSVNMLPAGGMLGSSLNRSDGLSNGYQQSSTNFSVGSGGNMSTMGVQRIASQMIPTPGFTVSSNHSHMNIDSSANGSSYSSVESTMVSQSQVQQQKQHVGGQSHVLQNLGSSQMSSGMRSGLIQKPFANSNGSINSGLGLIGNNIQLANEPVTSDGYASTYANSPKHLQQHFDHNPKPLVQGDGYGLNNIDTFASGSFYASGTSSGSMMNTQNTNPVKLPSIQKNSSLISGHTNLHGMQQAAHMKSQTINQLEKLNFQSSLTSRDALMHSQQQYQQRPQQFQQPEHYAQQQFQLKLQSQQPQHLVNNDAFSQSQLSSNLENQVKSELGIEHHKEVLNSHVSEQFHMSEMQSQFQPNSSEDCSRNAQYLTFPSGQHDLASSTPQNSQQMLHPHQLVAESQNNLSCVTVGAQSKAVALNQWPQSQDGDRMPDNNSHDQNLHMDFHQRISVQDEAQCNNLSSDVSNIGQAVASKGSTEVLDSGSTVKKAHRNQQRWLLFLLHARRCSAPEGRCQERFCSMAQKLCKHIEGCTLRHCPYPRCHHTRVLLHHFINCKDPHCPVCVFVRNYRRAFQFKPQIQPERGSSLPSTVNGSCKSYNMIPTSPGLISKPPSIIETAEDMHPSLKRIKIEHNTQSINPENENSASSVPANFESLVSRDAQFQAYPNTEKSVSIKPELTEIKAEVPAHLAHGKLSKMKMDDNNVNEKRPDCEPVKYDEPGNLARQESIKSEKEVGHDKQENVMQQSENAAGTKSGKPKIKGVSLTELFTPEQVRDHITGLRQWVGQSKSKAEKNAAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNDTRSENLMVDGTPIPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYLEEVERGERKPLPQNAVLGAKDLPRTILSDHIEQRLAKRLKQERMERARVQGKSYEEVPGADFLVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGAEAQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKLRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLCMLRKAAKEGIVADITNLFDHFFVSNGESRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDRCYEVELKREERERHPINQREKHALYPIEITEVPSDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKGGIDHPHKLTNHPSIADRDAQNKEARQMRVSQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEFGLVSEFLQIFVGGGWLVFSLLFYRFTAFCRIFLFKGESK* 1768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2315 1767 SUPERFAMILY RING/U-box 1537 1603 - -
Lja3g2315 1767 Pfam PHD-finger 1059 1101 IPR019787 -
Lja3g2315 1767 MobiDBLite consensus disorder prediction 247 286 - -
Lja3g2315 1767 SUPERFAMILY TAZ domain 669 750 IPR035898 -
Lja3g2315 1767 CDD PHD_HAC_like 1028 1100 - -
Lja3g2315 1767 ProSiteProfiles Zinc finger ZZ-type profile. 1556 1608 IPR000433 GO:0008270
Lja3g2315 1767 Gene3D - 1432 1491 IPR043145 -
Lja3g2315 1767 SUPERFAMILY TAZ domain 1617 1700 IPR035898 -
Lja3g2315 1767 ProSitePatterns Zinc finger ZZ-type signature. 1561 1588 IPR000433 GO:0008270
Lja3g2315 1767 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1118 1554 IPR031162 GO:0004402
Lja3g2315 1767 ProSitePatterns Zinc finger PHD-type signature. 1029 1100 IPR019786 -
Lja3g2315 1767 ProSiteProfiles Zinc finger TAZ-type profile. 1614 1698 IPR000197 -
Lja3g2315 1767 PANTHER CBP/P300-RELATED 133 1732 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lja3g2315 1767 SUPERFAMILY FYVE/PHD zinc finger 1062 1102 IPR011011 -
Lja3g2315 1767 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1053 1101 IPR013083 -
Lja3g2315 1767 Pfam Histone acetylation protein 1160 1376 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lja3g2315 1767 PANTHER HISTONE ACETYLTRANSFERASE HAC12 133 1732 - -
Lja3g2315 1767 Pfam Zinc finger, ZZ type 1558 1599 IPR000433 GO:0008270
Lja3g2315 1767 SMART zz_5 1555 1600 IPR000433 GO:0008270
Lja3g2315 1767 SMART zz_5 1435 1479 IPR000433 GO:0008270
Lja3g2315 1767 Gene3D - 1555 1605 IPR043145 -
Lja3g2315 1767 ProSiteProfiles Zinc finger TAZ-type profile. 665 746 IPR000197 -
Lja3g2315 1767 SMART TAZ_2 668 746 IPR000197 -
Lja3g2315 1767 SMART TAZ_2 1618 1696 IPR000197 -
Lja3g2315 1767 MobiDBLite consensus disorder prediction 880 902 - -
Lja3g2315 1767 SUPERFAMILY RING/U-box 1416 1486 - -
Lja3g2315 1767 MobiDBLite consensus disorder prediction 451 472 - -
Lja3g2315 1767 Gene3D TAZ domain 1612 1731 IPR035898 -
Lja3g2315 1767 ProSiteProfiles Zinc finger ZZ-type profile. 1436 1499 IPR000433 GO:0008270
Lja3g2315 1767 SMART KAT11_2 1151 1448 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lja3g2315 1767 Gene3D TAZ domain 662 751 IPR035898 -
Lja3g2315 1767 Pfam TAZ zinc finger 675 743 IPR000197 -
Lja3g2315 1767 Pfam TAZ zinc finger 1625 1695 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2315 Lja-Chr3 27917631 27930622 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lja3g2315 HAT_KAT11 8e-29 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2315 K04498 - gmx:100809207 2942.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2315 3 27917631 27930622 Lja3g2315 3 27917631 27930622 ECH