Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2311 ATGATGGAGGATCATTTCTTATCCTTCCCCATCCTTCTCAGTCTTATGGTCCTCTTAATGTTTATGATCCTAAAGAGATTTAAAACCACAAACACAGCCTCCAATCTTCCACCAGGGCCATGGAAGCTGCCAATTTTCGGAAGCATACACCACCTCATTGGCTCCCTTCCCCACCACCGCCTGAGAGAGTTATCCAAGAAATATGGCCCTCTCATGCACCTGCAACTTGGAGAGACATCAGCCATTGTGGTTTCTTCTTCAGAAATTGCCAAAGAGGTGTTGAAAACTCATGAAATCACATTTGCTCAACGACCTCGATCACTTGGTGCAGAAATTACAACTTATGGTTTCACTGACATTGCCTTTTCATCATATGGAGACTACTGGAGGCAGCTAAGAAAAATATGCGCACTGGAGCTGTTGAGTGCTAAATGTGTGCGATCATTCCATTCAATTAGGGAGGAAGAGGTATCAAATTTAATAAGATATATATCTATGAACACCGGATCATGTGTCAACCTCACGGATATAGTTTTATCTATGACATATAGCATAGTTGCAAGGGCAGCTTTTGGTGATAAATGCAAGGACCAAGAAGCATATATCCTCTTCATGAAGAAAAGTATGAGAGTGGCTGAAAGTTTCAGTGTTACTAATTTGTTTCCTTCCCAACGCTGGCTACTTGTGATTAGTGGAGCGATGAATAAATTTAAGGAATTGCATAGAACTACTGACAAGGTTCTAGAAAAAATCATCACTGAAGCAACAGCAAAGAGTGGTGGAGATGGAAGTCTTCTTTCTATTCTTTTGAATCTGAAAGATCATGGTGACCCTGAATTTCATTTGACCATCAACAACATTAAAGCCGTTCTTCAGGACATGTTTATTGCTGGAAGTGAGACATCATCTACCAGTTTGGAATGGACTTTCTCAGAAATGCTGAAGAACCCAAGAGTGATGAAAAGGGCTCAAGCAGAAGTTAGGCAAGTTTTTGGTAGCAGAGGGTATGTTGAGGAAATGGCTCTTGAAGAACTGAAATTTTTAAAAGCAGTGATTAAAGAAACTTTGAGATTACACCCTCCTATTCCTTTATTTCCAAGAGAGTGTGGTGAAACGTGTGAGATTGATGGTTACACAATACCAGTAGGAACCCAAGTAATTGTGAATACATGGGCAATTGGAAGAGACCTTTGCTGGAGTGAAGAAGAGAAGTTTTATCCTGAGAGATTCCTGGATTGTCCAATTGACTACAAGGGGTCCAATTTTGAATTCATACCTTTTGGTGCAGGAAAGAGAATCTGTCCTGGCATTTTGTTTGCTCTACCAAATATTGTACTCCCTCTAGCACAATTGCTGTACTATTTTGATTGGGAACTTCCATTTGGAACTAGTCATGAAGATTTTGACATGGCTGAAGCTTTTGGTACTACAGTCAGGAGGAAAAATGATCTAGTTGTGATTCCCATTTCTTACAATCCTGTTTCTGTTGAATAA 1494 0.4009 MMEDHFLSFPILLSLMVLLMFMILKRFKTTNTASNLPPGPWKLPIFGSIHHLIGSLPHHRLRELSKKYGPLMHLQLGETSAIVVSSSEIAKEVLKTHEITFAQRPRSLGAEITTYGFTDIAFSSYGDYWRQLRKICALELLSAKCVRSFHSIREEEVSNLIRYISMNTGSCVNLTDIVLSMTYSIVARAAFGDKCKDQEAYILFMKKSMRVAESFSVTNLFPSQRWLLVISGAMNKFKELHRTTDKVLEKIITEATAKSGGDGSLLSILLNLKDHGDPEFHLTINNIKAVLQDMFIAGSETSSTSLEWTFSEMLKNPRVMKRAQAEVRQVFGSRGYVEEMALEELKFLKAVIKETLRLHPPIPLFPRECGETCEIDGYTIPVGTQVIVNTWAIGRDLCWSEEEKFYPERFLDCPIDYKGSNFEFIPFGAGKRICPGILFALPNIVLPLAQLLYYFDWELPFGTSHEDFDMAEAFGTTVRRKNDLVVIPISYNPVSVE* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2311 497 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 PANTHER CYTOCHROME P450 71B11-RELATED 15 491 - -
Lja3g2311 497 Gene3D Cytochrome P450 29 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 491 - -
Lja3g2311 497 SUPERFAMILY Cytochrome P450 37 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 Pfam Cytochrome P450 37 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Lja3g2311 497 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2311 497 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2311 Lja-Chr3 27828733 27831869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2311 32 490 Cytochrome P450 AT2G30770 40.725 4.51e-121 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2311 - K23807 gmx:100779851 600.897