Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2310 ATGGAACTATACTGGGCTTGGGTGTCTGCTGCCACTTTGGCGACATGCTATGTCTTTGTAGACATATTTTTGAGGAGGTTGAATGGATGGTATTATGATCTAAAGTTATGCAAGAAACAACACCCTCTGCCTCCTGGTGATATGGGATGGCCTCTTATTGGCAATCTAATTTCCTTCTACAAAGATTTCTCATCTGGTCACCCTAATTCATTCACCAACAATCTTCTTCTCAAATATGGACAAAGCGGTATGTACAAGACTCACTTGTTTGGGAAGCCAAGCATAATCGTGTGTGAGGCTGAGATTTGTAGGAGAGTGCTTACAGATGATGTAAACTTTAAGTTTGCGTATCCAGAATCCCTGAGACAGTTGATACCAGTACAAAGCATTTCTCGTGCTGAACATAGGCAATTTCGGCGCCTAATCAACACTCCCATCATGAATCACCAGGCGCTAGCGGTGTACCTGGAACGCATCGAAAACATAATGATCAATTCGTTAGAAGAATTATCTAGCATGAAACACCCCGTTGAGTTGTTGAAAGAGATGAAGAAAGTCACCTTCAAAGTCATCATCGACATTTTAATGGGAACTTCCATTCCGCACATGATCACTCAAAACATGGAAAGTTTTTTTGCGGAGTTGTGTAATGGGATGCTCTCTGCCCCCATTAACGCACCTGGTTTTGTGTACCACAAAGCACTCAAGGCACGTAAGAAGCTGGCAAAAACAGTTCAATCTGTTGTAGACGAAAGGAGACTGAAATCGAAAAATGGCCAAGAAGGAAAAGATAAAGCTTTTATTGATAGTGTTCTGGAAGTCAATGATGAGAATGGTCGGAAACTGGAGGATGGGTATATTATTGACCTACTAATAGCAATATTATTTGCTGGCCATGAAACTTCTGCAACTACTATGATGTGGACAATTGTATATCTTACACAACACCCACACATCTTGAATAAAGCTAAGGAAGAGCAGGAAAAAATCATGAAGGTAAGAGTGTCCTCGCAGACTAGATTAAATCTTCAGGAAATTAAGCAAATGGTTTATCTTTCTCAGGTAATTGATGAGACGTTGCGGTGTGCCAATATTGTGTTTTCAATGTTTCGCGAAGCTACTTCTGACGTGAACATGAGTGGTTATGTTATACCGAAAGGATGGAGAGTGTTAATTTGGGGAAGGGCTGTTCATATGGATCCAGAAAATTACCCAAATCCAGAAGAGTTTAACCCATCGAGATGGGATGATTACCATGGCAAAGCTGGAACCTCTCTACCTTTTGGAGTAGGAAGTAGGCTGTGTCCCGGAAAGGACTTAGCAAAACTTGAAATTTCTATATTTCTTCATTATTTCCTACTTAACTACAAGTTGGAGCGAATAAATCCAGATTGTCCAATTACTTTCTTGCCAATACCCAAGCCCGTTGATAACTGTCTTGCTAAGGTGATAAAGGTTTCATGTAATTAA 1470 0.4048 MELYWAWVSAATLATCYVFVDIFLRRLNGWYYDLKLCKKQHPLPPGDMGWPLIGNLISFYKDFSSGHPNSFTNNLLLKYGQSGMYKTHLFGKPSIIVCEAEICRRVLTDDVNFKFAYPESLRQLIPVQSISRAEHRQFRRLINTPIMNHQALAVYLERIENIMINSLEELSSMKHPVELLKEMKKVTFKVIIDILMGTSIPHMITQNMESFFAELCNGMLSAPINAPGFVYHKALKARKKLAKTVQSVVDERRLKSKNGQEGKDKAFIDSVLEVNDENGRKLEDGYIIDLLIAILFAGHETSATTMMWTIVYLTQHPHILNKAKEEQEKIMKVRVSSQTRLNLQEIKQMVYLSQVIDETLRCANIVFSMFREATSDVNMSGYVIPKGWRVLIWGRAVHMDPENYPNPEEFNPSRWDDYHGKAGTSLPFGVGSRLCPGKDLAKLEISIFLHYFLLNYKLERINPDCPITFLPIPKPVDNCLAKVIKVSCN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2310 489 Pfam Cytochrome P450 44 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2310 489 SUPERFAMILY Cytochrome P450 42 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2310 489 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2310 489 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2310 489 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2310 489 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2310 489 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2310 489 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2310 489 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2310 489 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2310 489 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2310 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Lja3g2310 489 Gene3D Cytochrome P450 35 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2310 489 PANTHER CYTOCHROME P450 88D6 23 464 - -
Lja3g2310 489 PANTHER CYTOCHROME P450 26 23 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2310 Lja-Chr3 27820741 27827421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2310 24 486 Cytochrome P450 AT2G32440 50.429 3.12e-169 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2310 K04123 K17875 ag:BAG68929 713.375