Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2309 ATGGAATTATACTGGGCTTGGGTGTGTGCTGCCACTTTGGCGACATGTTATGTTTTAAGGAGGTTGAATGGGTGGTATTATGATGTGAAGCTAAGAAAGAAACAGTACCCTCTGCCTCCTGGTGATATGGGATGGCCTCTTATTGGCAATCTAATTCCTTTCTACAAAGATTTCTCATCCGGTCGTCCTAATTCTTTCATCAACAATCTTCTTCTCAAATATGGAGAAGGTGGTATCTACAAGACTCACTTGTTTGGGAACCCAAGCATAATCGTGTGTGAGCCTGAGATTTGTATGAGAGTGCTGACAGATGATGTGAACTTTAGAGTTGGGTATCCAACAACCATCAAAGAGTTGATACGATTAAAACACATCTCTCGTGCTGAACATAAGCAATACCGGCGTCTAGTCAATACTCTTCCCATCCTAGATCACCAAGCGCTAGCAACACTTTACCTGGAACGCATCGAGAACATTGTGACTAATTCGTTAGAAGAGTTGTCCAGCATGAAACACCCCGTTGAGTTGTTGAAAGAGATGAAGAAAGTAACCTTCAAAGTCTTCATCCACATTTTAATGGGCTCTTCCATTCACCACATGATCATTGAAAACATGGACACTTCTTTTGCTGAGTTGACTAATGGGATACTCTCTGCCCCTATTAACGCACCTGGTTTTGTTTTCCACAAAGCACTCAAGGCACGTAAGAAGCTAGCAAAAATACTTCAATCTGTTGTGGATGAAAGGAGGCTCAGATCGAAAAATGGTCAAGAGGGAAAAGATAAAGTATTTCTTGATAATCTTCTGGAAGCAAAGGATGAGAATGGTCGGAAACGGGACGACGAGTATATTGTTGACGTACTAATAGCACAATTATTTGCTGGTCATGAAACTTCTGCAACTGCTCTCATGTGGACAATTTTATATCTTACACAACACCCACACATCTTGGAAAAAGCTAAGAAAGAGCAGGAAGAAATCATGAAGGCAAGAGTGTCGTCACAGGGTAGATTAAATCTTCAGGAAATTAAGCAAATGGTTTATCTTTCTCAGGTAATTGATGAGACGTTGCGATGTGCTAATATTGTGTTTACAACATTTCGAGAGGCCATTTCTGACGTAAATATTAATGGTTATGTCATACCGAACGGATGGAGGGTGTTAGTTTGGGCAAGGGCTGTTCATATGAATCCAAAATACTACCCAAATCCCGAAGAATTTAACCCATCAAGATGA 1236 0.407 MELYWAWVCAATLATCYVLRRLNGWYYDVKLRKKQYPLPPGDMGWPLIGNLIPFYKDFSSGRPNSFINNLLLKYGEGGIYKTHLFGNPSIIVCEPEICMRVLTDDVNFRVGYPTTIKELIRLKHISRAEHKQYRRLVNTLPILDHQALATLYLERIENIVTNSLEELSSMKHPVELLKEMKKVTFKVFIHILMGSSIHHMIIENMDTSFAELTNGILSAPINAPGFVFHKALKARKKLAKILQSVVDERRLRSKNGQEGKDKVFLDNLLEAKDENGRKRDDEYIVDVLIAQLFAGHETSATALMWTILYLTQHPHILEKAKKEQEEIMKARVSSQGRLNLQEIKQMVYLSQVIDETLRCANIVFTTFREAISDVNINGYVIPNGWRVLVWARAVHMNPKYYPNPEEFNPSR* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2309 411 PANTHER CYTOCHROME P450 26 18 411 - -
Lja3g2309 411 Pfam Cytochrome P450 39 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2309 411 Gene3D Cytochrome P450 28 411 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2309 411 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2309 411 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2309 411 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2309 411 PRINTS E-class P450 group I signature 390 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g2309 411 PANTHER CYTOCHROME P450 88D6 18 411 - -
Lja3g2309 411 SUPERFAMILY Cytochrome P450 32 411 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2309 Lja-Chr3 27751336 27755225 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2309 17 411 Cytochrome P450 AT2G32440 46.734 2.14e-126 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2309 K04123 K17875 ag:BAG68929 573.548