Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2294 ATGGGTTTCCGCATACCAGGAATTGTTAGAAGGGCATCATTTTCTACGACTCAAGCAGCTTCCAAGGGATTTGAGATCCCAAAAGGCCATCTTGCAGTCTATGTTGGAGATAAAATGAAGCGGTTCATGATTCCAGTATCTTACTTGAACCAATCTTCATTTCAAGAGTTACTACATCAAGCAGAAGAAGAATTTGAATATGATCATCCAACAGGAGGTCTCACAATTCCATGCAGGGAGGATGAGTTCCTAAACCTCATTTCTCAGTTGAATGAGCTGTAA 282 0.4078 MGFRIPGIVRRASFSTTQAASKGFEIPKGHLAVYVGDKMKRFMIPVSYLNQSSFQELLHQAEEEFEYDHPTGGLTIPCREDEFLNLISQLNEL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2294 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 92 IPR003676 GO:0009733
Lja3g2294 93 Pfam Auxin responsive protein 13 88 IPR003676 GO:0009733
Lja3g2294 93 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2294 Lja-Chr3 27517492 27517773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2294 16 87 Calmodulin-binding Proteins AT5G20810 50.000 7.60e-19 75.1