Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2293 ATGATGATCGACGATGATATGGAGACTGGTACCTTGGGGGGTTACCAGGAAAGGCCAAGAACTTTCCCCAATATGCGTAGTAAAGCTTATACCCCGCTGATATTTCGTATTCTGCTGGGTATAAATGTTCGTGTCCTGTTTACGATTTTGTTGTTGGGGTTAGGAGCTATCTTTTACATGGGAGCGAGCACGTCTCCGATTATTGTGTTTGTCCTCACTATTTGTATACTCAGCTTCCTTGTGGCAATGTATCTTATGAAGTGGGTGCTTGCGAAAGATGAGGGCCCCCCTGAAATGGTTCAGATAGCGGATGCTATAAGAGATGGAGCTGAAGGATTTATCCGGACCCAGTATGGGAGTATATCCAAGATGGCGATGTTGCTTGCTTTCATCATTCTTTGCATATATTTGTTTCGCACTCCAACTCCTCAAATGGAAGCTTCTGGCATGGGAAGATCAACTTCTGCATACATCACTGTAGCTTCCTTCCTTTTAGGCGCTCTTTGTTCAGGTTTTGCTGGATATGTAGGGATGTGGGTGTCAGTTCGTGCCAATGTCCGAGTCTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCATTGCAGGTAGCTACTCGTGCAGGTGGTTTGTCTGCTATCATTGTTGTTGGTATGGCTGTAATTGGTATAGCAGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACTCGCCAGGTTCAATGAAGGTTACTGATTTGCCTCTTCTTCTCGTTGGATATGGATTTGGTGCCTCCTTTGTTGCATTGTTTGCTCAGTTGGGTGGTGGAATATACACTAAAGCAGCCGATGTTGGGGCAGACCTCGTTGGTAAAGTAGAGCAGGGAATACCTGAAGATGACCCTAGGAATCCTGCTGTTATTGCTGATCTGGTTGGAGACAATGTGGGAGATTGTGCCGCCAGAGGTGCTGATCTTTTTGAAAGTATTGCAGCTGAAATAATCAGTGCCATGATATTAGGGGGAACAATGGCGCAACGATGTAAAATTGAAGATCCATCTGGCTTCATCTTGTTTCCTCTTGTTATTCACTCATTTGATCTGGTAGTTTCATCGGTTGGAATATTTTCTATTAGGGGTACACGTGAGTCTGGAGTACTGGCTCCTATGGAGGATCCGATGGCAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGCCATTGTAGCATTTGGTCTGTCTACCCGGTGGTTACTTTATGTTGAGCAAGCACCTTCAGCGTGGTTCAATTTTGCTTTGTGTGGGTTGGTTGGTATTATCACAGCCTACATTTTTGTCTGGATAACCAAATATTATACTGACTACAAGCATGAGCCTGTGCGCACACTAGCCCTTTCTAGCTCTACAGGCCACGGGACTAACATAATTGCTGGAGTTAGTTTGGGCCTGGAATCTACTGCTCTTCCTGTCCTTGTAATCAGTGTGTCTATTATCTCAGCTTTCTGGCTGGGCCAGACATCTGGACTGATAGATGAAGCAGGAAACCAAACTGGTGGTCTGTTTGGCACGGCTGTGGCAACAATGGGAATGCTTAGCACTGCTGCCTATATCCTTACCATGGATATGTTTGGCCCAATAGCGGATAATGCTGGAGGAATTGTAGAGATGAGTCAGCAGCCTGAAAGTGTCCGGGAGATCACTGATGTCCTTGATGCTGTGGGAAATACAACCAAAGCCACCACCAAAGGATTTGCCATTGGTTCTGCTGCGCTTGCATCTTTCCTTCTGTTTAGTGCTTACATGGATGAGGTTTCTACATTTGCTCGCGAACCTTTTAAACAGGTTGATATTGCGATTCCAGAAGTTTTCATTGGTGGGTTGCTGGGTTCCATGCTAATATTTGTCTTTAGTGCTTGGGCCTGTGCTGCCGTTGGCCGTACTGCACAAGAAGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAAGAGAAACCAGATTATGCTCGCTGTGTTGCTATTGTAGCAGCTGCGTCTTTGAAAGAGATGATAAAACCTGGGGCTTTGGCAATCATTTCGCCTATTGCAGTTGGTTTTCTGTTCCGAATTTTGGGCTACTATACAGGGCATCCCTTACTCGGAGCTAAAGTCGTGGCCTCCATGCTGATGTTCGCAACAGTGTCTGGCATTCTTATGGCACTTTTTCTAAACACAGCTGGTGGTGCATGGGATAATGCAAAGAAGTACATAGAGACCGGAGCTCTTGGAGGCAAAGGAAGTGAGGCTCATAAAGCAGCAATTACAGGAGACACAGTGGGAGACCCATTCAAAGACACTGCTGGGCCTTCAATTCATGTCCTTATAAAGATGCTCGCAACGATTACACTGGTAATGGCTCCAATCTTCCTGTGA 2409 0.4533 MMIDDDMETGTLGGYQERPRTFPNMRSKAYTPLIFRILLGINVRVLFTILLLGLGAIFYMGASTSPIIVFVLTICILSFLVAMYLMKWVLAKDEGPPEMVQIADAIRDGAEGFIRTQYGSISKMAMLLAFIILCIYLFRTPTPQMEASGMGRSTSAYITVASFLLGALCSGFAGYVGMWVSVRANVRVSSAARRSAREALQVATRAGGLSAIIVVGMAVIGIAVLYATFYVWLGVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVIHSFDLVVSSVGIFSIRGTRESGVLAPMEDPMAILQKGYSVTIVLAIVAFGLSTRWLLYVEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIISAFWLGQTSGLIDEAGNQTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSTFAREPFKQVDIAIPEVFIGGLLGSMLIFVFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYARCVAIVAAASLKEMIKPGALAIISPIAVGFLFRILGYYTGHPLLGAKVVASMLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSEAHKAAITGDTVGDPFKDTAGPSIHVLIKMLATITLVMAPIFL* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2293 802 PIRSF H+-PPtase 60 802 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja3g2293 802 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 17 802 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja3g2293 802 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 65 802 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja3g2293 802 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 70 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja3g2293 802 Pfam Inorganic H+ pyrophosphatase 76 797 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja3g2293 802 PANTHER INORGANIC DIPHOSPHATASE-RELATED 17 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2293 Lja-Chr3 27499596 27509078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2293 1 802 Primary Pumps ATPases AT1G16780 86.284 0.0 1433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2293 K23025 - gmx:100787805 1417.14