Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2291 ATGAAACTTTCTACCATTACAAAACTCCCAAGCCAACTCAACAGGCTGGCATCATCCTCTGCTTCCCCTGCATTTGCCCGAAAGACGACACACAAACCGTTGTTGACGGCCGGTGAATTCTCTGATGGCTCACGGAGCAAGGTTCCCAAAGGATTCTTCGCTGTCTATGTCGGGCCGGAGTTTCGGAGGTTTGTGATTCCAATAAGCATCTTGGCCATGCCGGACTTCAGGGATTTGATGGAGAGGGTGGCTGAGGAGCATGGTTGTGATCATAGCGGTGCCCTTGAAATCCCCTGCGATGAAGAGCATTTTGAACATGTTTTGATGAACTGTTACGAAAGGCAACAGAGGTTATCTTCTAAGAAACACAAGATCAAGCTTGGTAAGATTCCTCTGGTGTATTAA 405 0.4765 MKLSTITKLPSQLNRLASSSASPAFARKTTHKPLLTAGEFSDGSRSKVPKGFFAVYVGPEFRRFVIPISILAMPDFRDLMERVAEEHGCDHSGALEIPCDEEHFEHVLMNCYERQQRLSSKKHKIKLGKIPLVY* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2291 134 PANTHER OS02G0143300 PROTEIN 32 121 - -
Lja3g2291 134 Pfam Auxin responsive protein 32 108 IPR003676 GO:0009733
Lja3g2291 134 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 32 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2291 Lja-Chr3 27454864 27455268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2291 48 117 Calmodulin-binding Proteins AT3G43120 52.857 6.76e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2291 K14488 - lja:Lj0g3v0159999.1 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2291 3 27454864 27455268 Lja3g2291 3 27454864 27455268 ECH