Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2265 ATGAGGCCGATTCAACTACCACCGCCCTCCACCTCCGCCACCGGTTCCCCCGGCGCTGCCGCTAACAACAACATCAACCGAGACCAGCGTCCTCAGAGGCGCCGGAAGGACCATCTCACCTTACCGCTACCCCAGCGTGACACCAACCTAGCGGTGCCGCTTCCGCTGCCTCCGTCAGGAGGCAGCGGCGGCAGCGGAGGAAGTGGAGGAAGCGGAGGAGGAGGAGGTTTGTCGCAGCTACAGCAGCAACTGGTGATCCCGTTCTCGGAGCTCGAGAGGCTCAACCGCATCGGGAGCGGTAGCGGCGGGACGGTTTACAAGGTGGTTCACCGCACCACCGGCCGAGTCTACGCGCTCAAGGTGATATACGGCCACCACGAGGAGTCCGTGCGGCGGCAGATCCACCGCGAGATCCAGATCTTGAGGGACGTCGACGATGTCAACGTGGTGAAGTGCCATGAGATGTACGACCACAACGCGGAAATCCAGGTTCTGCTGGAGTTCATGGATGGAGGATCCTTGGAAGGAAAGCACATCCCGCAGGAGCAGCAGCTCGCCGACGTCGCGCGCCAGATCCTCCGTGGGCTGGCGTATCTCCACCGCCGCCACATCGTCCACCGTGACATCAAGCCGTCGAACCTCCTCATCAACTCGAGGAAGCAGGTCAAGATCGCCGACTTCGGGGTTGGCCGGATCCTCAATCAAACCATGGATCCGTGCAATTCCTCGGTGGGGACGATCGCGTACATGAGCCCGGAGAGGATAAACACCGATATCAACGACGGCCAGTACGATGCCTACGCCGGCGACATATGGAGCTTTGGGGTGAGCATATTGGAGTTCTACATGGGAAGGTTTCCGTTCGCGGTTGGGAGGCAGGGTGATTGGGCTAGCTTGATGTGTGCGATTTGTATGTCTCAGCCGCCGGAGGCGCCGCCCACGGCGTCGCTGGAGTTCAGGGATTTCATTGGCCGGTGCTTGCAGAGGGACCCTTCTCGCCGGTTGTCAGCTTCCAGATTGCTTGCTCACCCTTTTCTGGCTCAGTCCAGCCCTCACAACAACCAGCCTCCTCCAAATCTTCATCAACTTCTTCCTCCTCCACCCAGGTCTCTTTCTTCATAG 1122 0.6007 MRPIQLPPPSTSATGSPGAAANNNINRDQRPQRRRKDHLTLPLPQRDTNLAVPLPLPPSGGSGGSGGSGGSGGGGGLSQLQQQLVIPFSELERLNRIGSGSGGTVYKVVHRTTGRVYALKVIYGHHEESVRRQIHREIQILRDVDDVNVVKCHEMYDHNAEIQVLLEFMDGGSLEGKHIPQEQQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSFGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPPTASLEFRDFIGRCLQRDPSRRLSASRLLAHPFLAQSSPHNNQPPPNLHQLLPPPPRSLSS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2265 373 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Lja3g2265 373 Gene3D Phosphorylase Kinase; domain 1 76 170 - -
Lja3g2265 373 MobiDBLite consensus disorder prediction 1 78 - -
Lja3g2265 373 Pfam Protein kinase domain 92 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2265 373 MobiDBLite consensus disorder prediction 347 373 - -
Lja3g2265 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lja3g2265 373 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 31 354 - -
Lja3g2265 373 Gene3D Transferase(Phosphotransferase) domain 1 173 357 - -
Lja3g2265 373 SMART serkin_6 91 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2265 373 MobiDBLite consensus disorder prediction 358 373 - -
Lja3g2265 373 MobiDBLite consensus disorder prediction 7 27 - -
Lja3g2265 373 ProSiteProfiles Protein kinase domain profile. 91 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2265 373 SUPERFAMILY Protein kinase-like (PK-like) 88 367 IPR011009 -
Lja3g2265 373 CDD PKc_MAPKK_plant_like 89 350 - -
Lja3g2265 373 MobiDBLite consensus disorder prediction 28 42 - -
Lja3g2265 373 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 31 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2265 Lja-Chr3 27131320 27133719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2265 1 362 MAP Kinase Kinase Gene Family AT1G51660 68.219 2.13e-168 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lja3g2265 Pkinase 2.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2265 K13413 - gmx:100818488 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2265 3 27131320 27133719 Lja3g2265 3 27131320 27133719 ECH