Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2256 ATGGAAAGCAAGGAGGAGAATTTTGAAGCTGCCAGAAAGTTCTTGAGAACTAGTTTGGAAACATCAACAGCTATTGCTTCTGCATTAGATGAGGCTGGATCAAATTTGGAGCGTCTTCAAAAGAGATGTTGCTCCCTGCAAGCTTCACTTAGATCCATCTCAATGCAAAAGTCATTTATTGACATTGGCAACGGTTTAGACAGCGTTCTTTGTTCCGCTGCTGCGGTCCTCAGGGTGTTTGACGCTTTGCATGAGTTGGAACATTCTCCCTTGACGGATTCCAGTTCTGATTTATGCATGTACGTCTCAAACACGAAGAAGCTAGAGGAAGCGCTGAAGCTTCTCGCAGATAATTGCAGGTTAGAAGTTGGTTGGTTGAATGGTGTTCTTGAGTTATTACAAGATAAAGCAATCACCAATGAGCTTTTCCTAGTGAACATAAAGAAGTCATTGAGAATATTGCAAGAATTGCAAGCGATAGAGGAAGGCGCTCGCCTCAATGGGGGCCTTCTCAGTATAGCCTGTGACAAGCTAGAGATTGTTTTCCACAGGCTTCTGATGGCAAACTCGATGCCTCTTACTTTGGTTTCCCTAACATCACACATTGATCACCACGCCACACCAGCTTTACCATTCCCAGCTTCTTTAACAAGGAAGTTGCAGTCCATCGCGGAAAGGTTAGACGCTAATGACAGACTAAGCAAGTGCCAATCTATATATGTTGAAGTTCGAGGTGTGAATGCTCGTCGAAGTCTGAAGACTTTGGATTTGAATTATCTTGAGATTCCAATAGCTGAATTTGAAAATGTGCAAGGTATAGAGAGTTACATTGACCAATGGGGGAACCATTTGGAGTTAGTTGTAAAACAACTGCTTGAGGTTGAGTACAAGCTTTCTGCTAGTGTCTTTGAGAAAATTTGTCCAGAAGCGTGGATGGAGTGTTTTGCAAAGGTTGCAATTGAATCTGGAATTCTTTCTTTCATTCAATTTGGAAGGGTTGTAGCTGAGAGGAAAAACGACCCCTTCAAGTTGTTGAACTTGCTGTCCATATTCAGAGTCTTGAATGGTCTAAGACTAAAATTCAACCATCTTTTCAGAGGGAAAGCTTGTGAAGAAATTCGAACTGCGACAAAGGATCTTATCAACAAAGTTGTCAATGGTGCCAGTGAGATATTCTGGCAACTTCCAGCACAAGTGAAGTTTCAAAGGCCAACTTCTCCTCCCCCAGATGGCAGCATTCCTCGGCTGGTAAGCTTTGTGACTGATTACTGCAATCAGCTGCTCAGCGATTCGTATAGGCCACATTTGATTCAGATTCTGGAAATACACCTTAGTTGGAGAGAGGAACCATATGAAGAGGGTGTTATTTTCACTCAAATATACACCATTATTAGAGAAGTTGCAGTAAATCTGGATGCTTGGTCAAAGGCCTATGAAGACATCACTTTGGCCTACCTTTTTATGATGAATAATCACTGTCATTTCCACAATTTGAAAGGTACTGTGCTAGGGAATATGATGGGAGATTCTTGGTTAAGGGCACATGAACAATATAAGGACTATTATGCAGCACTTTATTTGAGGAATAGCTGGGGAAAGCTTCAACCTATTCTTGCAGTTCAAAAGGACAAACTATCATCCTCCAATGTGCCAGTGACTAGCCAAGATATGGCTAAGAGACTAGTTGCTTTCAATCTAGCTTTTGATGAAAGGTACAAGAAGCAGTCTCATTGGGTTATTTCTGATGAGATCTTGAGGGAAAATGTATGCAAGCATTTGGTGGAAGGTATAGTACCAATCTACAGAGCCTACATGAAGAATTATATTTTGTCAATTGAAAATGATGCTAAGGTTGACAAACATATTAAATATACAGCTCAGAGTTTGGAGAATAGGATTAGGTCTTTGTTTCAGCCCGAGCTGAGCAAGCATGGTAGCATTAAACAGGTAGATTTGATTAGTAAAATAAAAGAAGTAAGCCATCAGTTTCGCTTGACTCTAACTGCTCTATAG 2013 0.4098 MESKEENFEAARKFLRTSLETSTAIASALDEAGSNLERLQKRCCSLQASLRSISMQKSFIDIGNGLDSVLCSAAAVLRVFDALHELEHSPLTDSSSDLCMYVSNTKKLEEALKLLADNCRLEVGWLNGVLELLQDKAITNELFLVNIKKSLRILQELQAIEEGARLNGGLLSIACDKLEIVFHRLLMANSMPLTLVSLTSHIDHHATPALPFPASLTRKLQSIAERLDANDRLSKCQSIYVEVRGVNARRSLKTLDLNYLEIPIAEFENVQGIESYIDQWGNHLELVVKQLLEVEYKLSASVFEKICPEAWMECFAKVAIESGILSFIQFGRVVAERKNDPFKLLNLLSIFRVLNGLRLKFNHLFRGKACEEIRTATKDLINKVVNGASEIFWQLPAQVKFQRPTSPPPDGSIPRLVSFVTDYCNQLLSDSYRPHLIQILEIHLSWREEPYEEGVIFTQIYTIIREVAVNLDAWSKAYEDITLAYLFMMNNHCHFHNLKGTVLGNMMGDSWLRAHEQYKDYYAALYLRNSWGKLQPILAVQKDKLSSSNVPVTSQDMAKRLVAFNLAFDERYKKQSHWVISDEILRENVCKHLVEGIVPIYRAYMKNYILSIENDAKVDKHIKYTAQSLENRIRSLFQPELSKHGSIKQVDLISKIKEVSHQFRLTLTAL* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2256 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 661 IPR004140 GO:0000145|GO:0006887
Lja3g2256 670 SUPERFAMILY Cullin repeat-like 76 637 IPR016159 -
Lja3g2256 670 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 661 - -
Lja3g2256 670 Pfam Exo70 exocyst complex subunit 279 634 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lja3g2256 670 Gene3D Exocyst complex component Exo70 140 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2256 Lja-Chr3 26929337 26931349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2256 10 657 EXO70 exocyst subunit family AT4G31540 47.872 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2256 K07195 - gmx:121175138 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2256 3 26929337 26931349 Lja3g2256 3 26929337 26931349 ECH