Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2228 ATGATTATTACCGTGAGAGAATCCACCATGGTGCGGCCGGCGGAGGAGGTGCCGCAGCGGACGGTGTGGAACTCCAACGTCGACCTGGTGGTGCCGAATTTCCACACGCCGAGCGTGTATTTCTACAGGGCCAATGGTGCGTCGAACTTCTTCGACGCCAAGGTGCTCAAGGAGGCGCTCAGCAAGGTGCTCGTGCCTTTCTACCCGATGGCTGGGCGGCTCCGCCGTGATGACGACGGGCGTGTTGAGATTGACTGTGACGGCCAGGGAGTGCTCTTCGTGGAGGCGGACACCGGCGCTGTCATTGATGATTTCGGTGACTTTGCGCCGACGCTACAGCAGCGGCAGCTCATCCCTGGCGTGGATTATTCACGCGGAATCGAAAGCTATCCTCTTTTAGTGTTGCAGGTAACACATTTCAAATGTGGAGGTGTCTCCTTAGGTGTTGGTATGCAGCATCATGTAGCTGATGGAGCTTCAGGTCTCCACTTCATCAACACATGGTCAGATGTAGCTCGCGGCCTGGATGTTTCCATCCCACCCTTTATCGACCGGACACTCCTCCGAGCCCGAGACCCGCCTCGGCCGGCTTTTGAGCACATTGAGTACAAACCCCCACCATCCATGGCAAAACCTGGCTCAGATAGTTCAGAGGTCTCTATCTTCAAGCTGACCCGCGACCAGCTCAACACACTGAAAGCCAAGTCCAGAGAAGAAGGCAACACAATCAACTACAGCTCCTATGAGATGCTAGCTGGTCACGTGTGGCGATCCGTGTGCAAGGCGAGAGCGCTTCCGGAGGATCAAGAAACCAAATTGTACATTGCAACTGATGGAAGGGCTAGGCTGCAACCTCCTCCCCCACCTGGTTACTTTGGCAATGTGATCTTCACCACCACGCCTTCAGCTGTGGCTGGTGATCTCATGTCAAAACCAACATGGTACGCTGCGAGCAGAATCCACAATGCCTTGTCGCGGATGAATAACGAGTATCTGAGATCTGCCCTAGACTATCTAGAGCTGCAGCCTGATCTTAAAGCGCTGGTTCGCGGAGCACATACTTTCAGGTGTCCGAATCTCGGTATCACTAGCTGGGCTAGGCTTCCAATTCATGATGCTGACTTTGGTTGGGGAAGGCCTATATTCATGGGACCTGGTGGGATTGCGTACGAGGGGCTGTCTTTCATCATTCCAAGCTCAACAGGTGATGGGAGCTTATCCGTCGCGATAGCTCTGCAGCCTGAGCATATGAAGGTGTTTAAGGATTTGCTCTATGACATTTGA 1284 0.5382 MIITVRESTMVRPAEEVPQRTVWNSNVDLVVPNFHTPSVYFYRANGASNFFDAKVLKEALSKVLVPFYPMAGRLRRDDDGRVEIDCDGQGVLFVEADTGAVIDDFGDFAPTLQQRQLIPGVDYSRGIESYPLLVLQVTHFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTLLRARDPPRPAFEHIEYKPPPSMAKPGSDSSEVSIFKLTRDQLNTLKAKSREEGNTINYSSYEMLAGHVWRSVCKARALPEDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPSAVAGDLMSKPTWYAASRIHNALSRMNNEYLRSALDYLELQPDLKALVRGAHTFRCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTGDGSLSVAIALQPEHMKVFKDLLYDI* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2228 427 Pfam Transferase family 2 422 - -
Lja3g2228 427 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 426 - -
Lja3g2228 427 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 426 - -
Lja3g2228 427 Gene3D - 209 427 IPR023213 -
Lja3g2228 427 Gene3D - 1 205 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2228 Lja-Chr3 26520285 26526457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2228 1 427 Monolignol Biosynthesis Gene Families AT5G48930 77.136 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2228 K13065 - gmx:100820075 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2228 3 26520285 26526457 Lja3g2228 3 26520285 26526457 ECH
Lja3g5269 3 94935380 94939246 Lja3g2228 3 26520285 26526457 PCT