Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2223 ATGGCTGCCTCCTCATCCCACCTCACATGCTCCCTCCTGCTACTCACCTTCATCACATTCACAATCTCTCCTGTCACCGCCACCGACCACATTGTAGGCGCTAACCGTGGCTGGAACCCCGGCCAAAACTACACTCTTTGGGCCAACAACCAAACATTCTATGTCGGCGATTTCATCTCATTCAGGTATCAGAAGAACCAGTACAATGTGTTTGAGGTGAACCAAACTGGGTATGACAACTGCACTACTGAAGGGGCTTTTGGGAATTATAGTAGTGGGAAGGATTTCATAATGCTGAATAAGACAGGGAGACACTACTTCATTTGTGGTAATGGACAATGCTTCAATGGGATGAAGGTCTCTGTTGTTGTCCATCCTCTTGCTGCTCCTCCTACCTCATCGACTGGAGAACATTCAACGCCAAAATCTTCTGCTCCTGTGGTCTTGGAACGGGGTCTCTGGTCTCTATTATTGTCTAATTTAGCTTGGTTTGGATTTGTGTGTTGGATCTAG 513 0.4698 MAASSSHLTCSLLLLTFITFTISPVTATDHIVGANRGWNPGQNYTLWANNQTFYVGDFISFRYQKNQYNVFEVNQTGYDNCTTEGAFGNYSSGKDFIMLNKTGRHYFICGNGQCFNGMKVSVVVHPLAAPPTSSTGEHSTPKSSAPVVLERGLWSLLLSNLAWFGFVCWI* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2223 170 PANTHER BLUE COPPER PROTEIN 13 160 IPR039391 GO:0009055
Lja3g2223 170 SUPERFAMILY Cupredoxins 27 125 IPR008972 -
Lja3g2223 170 PANTHER OS09G0557900 PROTEIN 13 160 - -
Lja3g2223 170 Pfam Plastocyanin-like domain 38 118 IPR003245 GO:0009055
Lja3g2223 170 ProSiteProfiles Phytocyanin domain profile. 28 126 IPR003245 GO:0009055
Lja3g2223 170 Gene3D - 27 136 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2223 Lja-Chr3 26458482 26459680 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2223 3 134 Phytocyanin Superfamily AT5G15350 38.060 2.09e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2223 - - gmx:100305555 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2223 3 26458482 26459680 Lja3g2223 3 26458482 26459680 ECH