Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2222 ATGCCTTCAAGACCCATCCCTCCACAAATTCCAAGTCCCACATTCCTTACCAAAACCAGAATCATGTTCCTGGCACTCACAGTCTCAGCTTCTCTTGTGATCTTCTTCTCAGTCCTTTACTTCCTATACTATCTATGGCACTCCCTTGTACACAGAGCTAAGAGTAAAACCATACCCTTTGAAGCAAGTTCTCCCTTGAAGCTCCAAAGCTTCTCATACAAAGAGCTAAAGCAAGCTACCAATAACTTTGACACTGCCAGTGTCATAGGTAAAGGTGGCTCTGGAACTGTTTTCAGGGGAATACTCAAAGATGGGAAGCTTGTTGCGGTGAAGCGCCTCGACGAGTTGTCTTTGCAGACGGAGCGGGAGTTTCAGAATGAGCTGCAGATTCTTGGTGGGTTGAGATCACCTTTCTTGGTGACCCTATTGGGATATTCAGTGGAAAAGAGTAAGAGACTCTTAGTGTTTGAATACATGCCTAACAGAAGCTTGCAGGAGTCACTCTTTGGAGATGGATGCTTGTGCTTGAGTTGGGAGAGGAGATTTAGCATCATATTGGATGTTGCTAGAGGGTTGGAATTCTTGCACCTTGGATGTGATCCTCCAGTAATACATGGAGATATTAAGCCAAGCAATGTCCTGCTTGATGCAGAGTTCAATGGGAGAATCTCAGACTTTGGGTTGTCAAGGATTAAAGTGGAGGGTGAATTTGGTGTGGATTTGTTTAGCCAGGACTTAGGGAAGAGCCAGGATCTTTGGAAAAGCCAAGAGAATTTTTCAGCTAATCTAACTCCAGAAACTCCAGCTGTTCATACTCCAGTGGACAGTGCTAGTGAAGTAGATTTTGCTATGGCCTTGCAAGCTTCTTCTTCATCCAAAAATAGCAGGACATGCTTGAATGTTGGAGCTTTGAACTTGAATTCTTTGAATTATAATGCCAATATTGTCACTGAGAGTGAAATTAGGAGTGGAAATGCAAAGGGGAAGGAAGTTTCGACCTCGGATGTAGGTGGGAATGATTGGAATAGTAAGTTTGTGCCTTATGATGATGAGTTTTCTAGCATTGATCATAGTAAGGAGTTAACTGCTAACTCTTCTTTGGTGGATGATGAGAAGGGAAATGGAAAACAATGGGGAAAGGACTGGTGGTGGAAACAGGATGGAAGTGGTGAGTTATGCAGCAAAGACTATGTCATGGAGTGGATAGGGAGTCAGATTTCTCCATCAAACCCTGATTGGGATGATGGAAAGAGCAATCTTCATGAGAAAATTGAGTTGGAGAATTCAAGTCCATTAGAAAAACCAAATGATGCAAATGGACCCCAATTACAGGTTTTTGAGATAGGAAAGACAGATGAAGAAGTTGAGAAGAAAGAAACAAGGGGAAAGAAAAATCAGAAGAAGAAGCAAAGGAATATGCAAGAGTGGTGGAAAGAAGAGAAATTAAGCAAGAGGAGAACTAAGCTGAGAAATCTTCACATGAAATGGAAGAGAGGCATGAAAGTACCTCATTTTGATTTAGGTAGACGATTTTATCTTTGCAGGCGTAGCAACTTTGCCGAGGTGAGTCATAATGAGTGTGATCCTGGGGAATTTAGTTTCAGGAGAGGTTGGAAGAAGAAAAGTACTCGTTCTATTGGAAGTGACATGTGGAGTGGAGATTTATTTAGCCGTGAACTCAGCAGCACAACCAGCATGAGAGGCACACTGTGCTATGTTGCACCGGAATATGGTGGTGGTGGGTTCTTGATGGAGAAGGCTGATATTTACAGCTTAGGAGTTCTGATTCTTGTTATTGTGTCAGGTAGAAGACCACTCCATGTTCTTGCATCCCCCATGAAGCTGGAGAAAGCTAACTTAATAAGCTGGTGCAGGCACTTGGCTCAAGCTGGTAACATTTTGGAGTTGGTAGATGAAAGATTGAAAGAAGATTACAACAAGGACCAAGCTAGCTTGTGTATTAACTTGGCACTCACTTGCTTACAGAAAGTTTCGGAATTGCGCCCGGATATTGGGGATATTGTTAGGATTTTGAAGGGGGAGATGGATCTTCCACCACTTCCATTTGAGTTATCCCCTTCTCCAGGTTCTAAATTATATAGCAGATCAAGGAGAAGAAATGCAGAATAG 2130 0.4258 MPSRPIPPQIPSPTFLTKTRIMFLALTVSASLVIFFSVLYFLYYLWHSLVHRAKSKTIPFEASSPLKLQSFSYKELKQATNNFDTASVIGKGGSGTVFRGILKDGKLVAVKRLDELSLQTEREFQNELQILGGLRSPFLVTLLGYSVEKSKRLLVFEYMPNRSLQESLFGDGCLCLSWERRFSIILDVARGLEFLHLGCDPPVIHGDIKPSNVLLDAEFNGRISDFGLSRIKVEGEFGVDLFSQDLGKSQDLWKSQENFSANLTPETPAVHTPVDSASEVDFAMALQASSSSKNSRTCLNVGALNLNSLNYNANIVTESEIRSGNAKGKEVSTSDVGGNDWNSKFVPYDDEFSSIDHSKELTANSSLVDDEKGNGKQWGKDWWWKQDGSGELCSKDYVMEWIGSQISPSNPDWDDGKSNLHEKIELENSSPLEKPNDANGPQLQVFEIGKTDEEVEKKETRGKKNQKKKQRNMQEWWKEEKLSKRRTKLRNLHMKWKRGMKVPHFDLGRRFYLCRRSNFAEVSHNECDPGEFSFRRGWKKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGGGFLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGNILELVDERLKEDYNKDQASLCINLALTCLQKVSELRPDIGDIVRILKGEMDLPPLPFELSPSPGSKLYSRSRRRNAE* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2222 709 PANTHER OS08G0275200 PROTEIN 1 708 - -
Lja3g2222 709 Pfam Protein kinase domain 85 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2222 709 MobiDBLite consensus disorder prediction 449 475 - -
Lja3g2222 709 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Lja3g2222 709 Gene3D Phosphorylase Kinase; domain 1 56 158 - -
Lja3g2222 709 SUPERFAMILY Protein kinase-like (PK-like) 60 695 IPR011009 -
Lja3g2222 709 ProSiteProfiles Protein kinase domain profile. 83 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2222 709 MobiDBLite consensus disorder prediction 688 709 - -
Lja3g2222 709 PANTHER OS07G0586332 PROTEIN 1 708 IPR044576 -
Lja3g2222 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Lja3g2222 709 Gene3D Transferase(Phosphotransferase) domain 1 530 683 - -
Lja3g2222 709 Gene3D Transferase(Phosphotransferase) domain 1 159 260 - -
Lja3g2222 709 SMART serkin_6 83 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2222 Lja-Chr3 26444598 26447104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2222 546 678 Receptor kinase-like Gene Family AT3G58690 31.343 8.21e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lja3g2222 Pkinase 8.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2222 - - ccaj:109812677 1117.83