LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja3g2217	ATGGAAATCCTTCAAGCCACTCTGGACAAAATGGAGCAGAGTTTCAAGAGATTCATGACACCCTTTGTTGTATTTTTCCTAGCTTTTCCTGTTCTAATAGTCACTCTAATCATGTACAGAAACTCAAACTCAACACTTTTTGAGGCTGTATCAGAAAGCGTTGAACTCAGAGCAAAAACTCATAACATTTCAAATGATGAGTTGGGAAGTACAGGGTCAAACAACACAACCAACGGTGGTTTTCTATTGGGGGGAAGAGGAAGAGTGCATAATATATCAGATCAGAACATAGTAGGAGATGGAATTGTAAGGCACAATAGTTCTGTGTCAGAGGTCAGAGATCAGAAAATTCAAAACGTTACAGCTGCTACTGAAGGAACAGTTACAGCTAACAATAATAATCTCTCATCCAAAGTAGGCTCAAAAAATGACTCACTTAATACAAGTTCGACAAATGATTCAGCAGCGCATGTTGAAATTCCTGATGTCAAAGACAAATTGCTTCATGGATTGCTAGCTTCTGGATTTGATGAAGCATCATGCATAAGCAGGGTACAATCCCAATTTTATGGCAAAGCTTCTCCTCATAGACCCTCTTCATATTTGGTATCTAAATTAAGGAACTATGAAAAAATTCATAGAAAGTGTGGACCAAATACTAGAGCTTACAACAGAAGCATAGTAAAGATTGTTCGTTCTAAGAACAATGGTGCTGTTGGTACAATGTGTAAGTACCTTGTTTGGACACCTGCCAATGGTTTGGGAAACCAAATGATTAGCATAGTTGCAACATTTCTCTATGCAATCCTCACTGACAAAGTGTTGCTTCTGAGATTTGGGAAAGATAAACATGGTTTATTTTGCGAGCCTTTTCTCAATTCAACTTGGATTTTACCTCAAAAATCTCCATTTTGGAATGATAATCAGGTCGAAACATACAAGAGCATGCTAGAGAAGGACAAGAGTTACAACACTTCAAAGGGGCATTTACCATCCTCTGTGTTTCTTAATCTAGCACACACCCGCGATGATCCTGAGAAGTTTTTTCACTGCGATCATAGTCAAGAACTTCTAAAGAAGGTTCCTTTGTTGATTCTGCTGTCAGATCAGTATTTTGTCCCTTCTCTTTTCATGACCCCAATTTTCAGTTGGGAGATTAACAAAATGTTCCCAGAAAAAGACACACTTTTCCACCATTTGGGGCGCTACCTTTTTCACCCTTCAAATGAGGCTTGGAGTCTAATCACCGGGTTCTATCAGAAAAACTTGGCTAAAGCAGATGAGAGAATAGGCCTACAGATTAGAGTATTCAATCATGCTTCCACTCCAAAACAATCAGTTATGGAATTAATTTTGAGCTGCATCATTAAAAATCAGCTAATACCAGAAGTACTTGGTATGCAAAATTCAGTGTCTTCTACTAGCAAAAATCAGACTACAAAGGCTGTTCTAGTTGCATCTTTATATCCAGAATATGGTGAGAATTTAAAGACAATGTATCTGAGAAAAGAAACTGTATCAGGGGAAGTAGTAGAGGTTTATCAAGCAAGTCATGAAGAGCATCAAAAGTTCAATGATGACATGCATAATATAAAGGCCTGGGTGGACATGTATCTACTGAGTTTATCTGATGTTTTGGTGACTACCTCTCGATCTACTTTTGGTTATGTTGCACAAGGTTTGGGAAATTTGAGGCCATGGCTTCTTCAAAGGCTCGCCGGTAACGAAAAACATTTTCCAACTTGCAAAAGGGACTTCTCAATGGAGCCTTGTAATCATTATCCTCCTAAGCATTTCTGCAATGGAAAGCCTATTGAAGATTTTGCATCTTCTTTCGGTTATTTGAGGAAATGCGAGGATTCTTCTTTTCAGGTGAAGCTGGTCAATGGTTCTGTGTAG	1899	0.3849	MEILQATLDKMEQSFKRFMTPFVVFFLAFPVLIVTLIMYRNSNSTLFEAVSESVELRAKTHNISNDELGSTGSNNTTNGGFLLGGRGRVHNISDQNIVGDGIVRHNSSVSEVRDQKIQNVTAATEGTVTANNNNLSSKVGSKNDSLNTSSTNDSAAHVEIPDVKDKLLHGLLASGFDEASCISRVQSQFYGKASPHRPSSYLVSKLRNYEKIHRKCGPNTRAYNRSIVKIVRSKNNGAVGTMCKYLVWTPANGLGNQMISIVATFLYAILTDKVLLLRFGKDKHGLFCEPFLNSTWILPQKSPFWNDNQVETYKSMLEKDKSYNTSKGHLPSSVFLNLAHTRDDPEKFFHCDHSQELLKKVPLLILLSDQYFVPSLFMTPIFSWEINKMFPEKDTLFHHLGRYLFHPSNEAWSLITGFYQKNLAKADERIGLQIRVFNHASTPKQSVMELILSCIIKNQLIPEVLGMQNSVSSTSKNQTTKAVLVASLYPEYGENLKTMYLRKETVSGEVVEVYQASHEEHQKFNDDMHNIKAWVDMYLLSLSDVLVTTSRSTFGYVAQGLGNLRPWLLQRLAGNEKHFPTCKRDFSMEPCNHYPPKHFCNGKPIEDFASSFGYLRKCEDSSFQVKLVNGSV*	633

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja3g2217	632	MobiDBLite	consensus disorder prediction	123	153	-	-
	Lja3g2217	632	Gene3D	-	413	571	-	-
	Lja3g2217	632	PANTHER	FUCOSYLTRANSFERASE 2-RELATED	15	631	IPR004938	GO:0008107\|GO:0016020\|GO:0042546
	Lja3g2217	632	Pfam	Xyloglucan fucosyltransferase	160	600	IPR004938	GO:0008107\|GO:0016020\|GO:0042546
	Lja3g2217	632	PANTHER	GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN	15	631	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja3g2217	Lja-Chr3	26377662	26380059	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja3g2217	165	628	Xyloglucan Fucosyltransferase1	AT2G03220	48.414	5.57e-150	443