Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2212 ATGTCTCTGAAGATAGCAGCTGAAAGTTGGCCAAAATCAGCATTAGAGAGGGTAGAGGAGCCATTGGTGGTGGTGAGAGAGTATGATGAAGAGAGGCACAAGGTGGCAGTAGAGAAACTGGAGAAGCTTTGTGAAATTGGGCAGAGAGGAAAACCATCTCTTGTCACTGACCTCATGGGGGACCCTATATGCCGAATTCGTCACTTTCAATTGCATGTCATGCTGGTTGCAGAATATGGAGAAGGAGAAGTTGTTGGGGTGATAAGGGGGTGTGTAAAAACAGTTACAAGAGGGGACTCGGTTTACGTAAAGTTGGCTTATGTTTTGGGGCTTAGAGTCTCCCCTCAACACAGGAGACTTGGCATTGGCACAAAACTAGTTGAAAATTTAGAAGAATGGTGCAAGCAAAAGGGGGCAAAGTATACATACATGGCAACTGACTGTACAAATGAGCCATCCATCAATTTGTTCACAAAAAAATGTGGGTACTCAAAGTTCAGGTCTCTAACCATGCTAGTACAACCTGTCCATGCTCACTACAAGCCAATCAGCAGAAGCATTGCAGTCCTTCACATTCCACCAAGCCTAGCAAAGTCCATGTACAACCACATGTTTGCCAATTCAGAATTTTACCCTAAAGACATAGACTCAATTTTATCAAACAAGCTGAATTTGGGGACTTTCATGGCCATCCCCAAGAAGCACCTCTCCAAATGTGACCTAACAAGGGGGATTCTCCCTCCTAGCTATGCAATGTTGAGTGTGTGGAACACCAAGGAAGTGTTCAAGTTGCAAGTTAAGGGGGTTTCACCACTAGCACATGCTTGCTGTGTAGGTACAAGGTTGTTGGATGAGTGGTTACCATGGCTGAGGTTACCTTCATTTCCTGATATTTTTAGGCCATTTGGGGTTTATTTTCTGTATGGACTGCACATGGAAGGAAAGCGTGGTCACCACCTGATGAAGGGTCTATGTGGATTTGTACATAACATGGCAAGAGATGATGGTGGTTGTGGGGCCGTTGTGGCTGAACTGGGCCAGAGGGACCCTGTTAGAGATGCAGTCCCACATTGGAGAAAGTTTTCATGGGCTGAGGACATGTGGTGCATTAAGAATCTTGAGGACGCGAAGCAGGGGATAGTACCTGAAAAGTGTGGGCCATCTGGTTTTTTCACATCTAGGTCCTCTTCGCCAGTAATTTTTGTTGATCCTCGTGATTTTTGA 1224 0.4526 MSLKIAAESWPKSALERVEEPLVVVREYDEERHKVAVEKLEKLCEIGQRGKPSLVTDLMGDPICRIRHFQLHVMLVAEYGEGEVVGVIRGCVKTVTRGDSVYVKLAYVLGLRVSPQHRRLGIGTKLVENLEEWCKQKGAKYTYMATDCTNEPSINLFTKKCGYSKFRSLTMLVQPVHAHYKPISRSIAVLHIPPSLAKSMYNHMFANSEFYPKDIDSILSNKLNLGTFMAIPKKHLSKCDLTRGILPPSYAMLSVWNTKEVFKLQVKGVSPLAHACCVGTRLLDEWLPWLRLPSFPDIFRPFGVYFLYGLHMEGKRGHHLMKGLCGFVHNMARDDGGCGAVVAELGQRDPVRDAVPHWRKFSWAEDMWCIKNLEDAKQGIVPEKCGPSGFFTSRSSSPVIFVDPRDF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2212 407 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 199 IPR000182 GO:0016407
Lja3g2212 407 Pfam Acetyltransferase (GNAT) family 73 163 IPR000182 GO:0016407
Lja3g2212 407 PANTHER OS12G0561600 PROTEIN 1 407 - -
Lja3g2212 407 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 72 169 IPR016181 -
Lja3g2212 407 PANTHER N-ACETYLTRANSFERASE 1 407 - -
Lja3g2212 407 Gene3D - 21 168 - -
Lja3g2212 407 CDD NAT_SF 74 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2212 Lja-Chr3 26315028 26318197 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja3g2212 Acetyltransf_1 2.7e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2212 - - gmx:100799977 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2212 3 26315028 26318197 Lja3g2212 3 26315028 26318197 ECH