Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2207 ATGTCGGGGCAAACACAGCGTCTGAATGTGGTGCCCACAGTGACGATGCTTGGAGTGGTGAAAGCGCGTCTGGTCGGAGCCACCAGAGGCCACGCGCTTCTCAAGAAGAAGAGCGACGCTCTCACGGTGCAGTTTCGTCAGATCCTGAAGAAGATCGTGTCCACCAAGGAATCAATGGGTGACATCATGAAGAACTCTTCTTTTGCCTTAACTGAGGCTAAGTATGTTGCTGGTGATAACATCAAGCATGTGGTCCTTGAGAATGTTAAGGAAGCTTCCCTCCGGGTCCGTTCTCGTACGGAGAATGTGGCCGGAGTTAAGCTCCCTAAGTTTGATTATACTGCGGATGGTGATGCATCGAAGAATGATCTCACCGGGTTGGCGAGGGGTGGCCAGCAGGTGCAGCAGTGCCGCGTCGCTTACATCAAGGCGATTGAGGTTCTTGTGGAGCTTGCTTCCCTTCAGACCTCTTTCCTCACCCTTGATGAGGCTATTAAGACCACCAATAGAAGGGTCAATGCTCTTGAGAATGTGGTCAAGCCGCGATTGGAGAACACCATTAGTTACATCAAGGGGGAACTGGATGAGCTTGAGAGGGAGGATTTCTTCAGGCTGAAGAAGATTCAGGGGTATAAGAGGAGGGAAATTGAGAGGAAGAGGCTGGAGGCGGCTGCAAAGGACAAGCTTGGTGACAAGTTCCCCTTGCACAAAGATGTTTCCTTCAATTCTCAGAACTTGTTGGCTGCAGCGGGTGGCAAAGATGAGGATATCATTTTCTGA 780 0.5077 MSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKNSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRTENVAGVKLPKFDYTADGDASKNDLTGLARGGQQVQQCRVAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKRREIERKRLEAAAKDKLGDKFPLHKDVSFNSQNLLAAAGGKDEDIIF* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2207 259 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 259 IPR002699 GO:0046961
Lja3g2207 259 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 1 259 - -
Lja3g2207 259 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 9 212 IPR002699 GO:0046961
Lja3g2207 259 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Lja3g2207 259 Coils Coil 180 200 - -
Lja3g2207 259 Gene3D - 1 199 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2207 1 259 Primary Pumps ATPases(2) AT3G58730 77.481 3.31e-146 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2207 K02149 - gmx:100808847 434.106