Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2204 ATGGAGATCCCTGTTGATACTTCATCAGTTTCCGGCCACACCGTGTGTGTCACCGGCGCTGGCGGGTTCATTGCCTCCTGGCTGGTCAAACTTCTCTTGGAGAAAGGCTACATCGTTAGGGGAACCGTGAGAAACCCAGATGATCCAAAGAATGGTCACCTGAAAGAGTTGGAAGGAGCCAGGGAGAGGCTAACTCTACATAAGGCTAATCTCCTTGATCTTGATTCTCTTAAACATGTCTTTCATGGTTGCGATGGTATCTTCCACACTGCCTCTCCTGTCACTGAAAACCCTGATGAGATGTTGGAGCCCTCAGTGAATGGAACCAGGAATGTGGTCATGGCAGCTGCAGAAGCAAAAGTGAGACGATTGGTGTTCACTTCATCAATTGGCACAGTTTATATGGACCCCTATAGGAGCAGGGATGTAGTGGTTGATGAATCATGCTGGAGTGATCTGGAGTACTGCGAGAACACCAAGAATTGGTACTGCTATTGGAAAACCGTGGCTGAGCAAATAGCATGGGATGCAGCAAAAGTAAAAGGAGTAGACTTGGTTGTGGTGAACCCTGTAATGGTTATTGGGCCATTACTACAACCCACTCTCAATGCTAGTACAATTCACATCCTCAAGTACCTTACTGGCTCTGCTAAAACTTATGTGAATGCTACTCAGGCTTATGTGGATGTTAAGGATGTTGCATTAGCCCACGTTCTTGTGTATGAGACACCATCTGCTTCTGGCAGATATCTTTGTGCTGAAAGTTCACTGCATCGTGGTGAACTCGTTGAATTTCTCGCCAAATATTTCCCTGCGTATCCAATTCCTACCAAGTGTTCAGATAGAAAGAACCCGTGGGTCAAGCCCTACAAATTTTCAAATCAGAAGCTAAAAGACTTAGGATTAGAATTCACACCAGTGAAGCAAGTTCTGTATGACACCATTAAAAATCTGCAGGAGAAAGGCTGCCTTCCTGTCCCCATAAAGCAAGACGACGCTTACATTGCAGCTAGGCTGTGA 1020 0.4578 MEIPVDTSSVSGHTVCVTGAGGFIASWLVKLLLEKGYIVRGTVRNPDDPKNGHLKELEGARERLTLHKANLLDLDSLKHVFHGCDGIFHTASPVTENPDEMLEPSVNGTRNVVMAAAEAKVRRLVFTSSIGTVYMDPYRSRDVVVDESCWSDLEYCENTKNWYCYWKTVAEQIAWDAAKVKGVDLVVVNPVMVIGPLLQPTLNASTIHILKYLTGSAKTYVNATQAYVDVKDVALAHVLVYETPSASGRYLCAESSLHRGELVEFLAKYFPAYPIPTKCSDRKNPWVKPYKFSNQKLKDLGLEFTPVKQVLYDTIKNLQEKGCLPVPIKQDDAYIAARL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2204 339 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 328 - -
Lja3g2204 339 CDD FR_SDR_e 15 302 - -
Lja3g2204 339 Gene3D - 5 339 - -
Lja3g2204 339 Coils Coil 54 74 - -
Lja3g2204 339 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 328 - -
Lja3g2204 339 Pfam NAD dependent epimerase/dehydratase family 15 246 IPR001509 -
Lja3g2204 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2204 Lja-Chr3 26198442 26202982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2204 10 278 Monolignol Biosynthesis Gene Families AT1G80820 70.260 9.19e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2204 K09753 - gmx:100811528 571.622