Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2203 ATGCCGGCTCCTGCTGACACATCATCAGTTTCCGGCGATATCGTGTGTGTCACCGGCGCCGGCGGGTTCATTGCATCATGGCTCGTCAAACTTCTCTTGGAGAGAGGCTACATTGTCAGAGGCACCGTGCGAAACCCAGATGATCCTAAGAATGGACACTTGAAAGAGTTGGAAGGAGCCAAGGAGAGGCTAACTCTGCATAAGGCTGATCTCTTTGATCTTGATTCTCTGAAAGCAGTCTTTCATGGTTGCGATGGTGTCTTCCACACCGCCTCCCCGGTCACTGATAACCCCGAAGAGATGTTGGAACCCGCAGTGAACGGAGCCAGGAATGTAGTCATGGCAGCTGCAGAAACAAAGGTGCAACGAGTTGTATTCACTTCATCAATTGGGACAGTATACATGGACCCCAATAGGAGCAGAGATGAGGTGGTTGATGAATCATGCTGGAGTGATCTGGAGTACTGCAAGAATACCAAGAATTGGTATTGCTATGGGAAGACAGTGGCAGAGCAAGTAGCATGGGAAGCTGCAAAAGAGAAAGGAGTGGACTTGGTTGTGGTGAACCCTGTTTTGGTTATTGGACCATTACTACAACCTACTATCAATGCAAGTACAATTCACATTCTCAAGTACCTTACTGGCTCTGCTAAAACTTATGTGAATGCAACTCAGGCTTATGTGGATGTTAAGGATGCGGCATTAGCCCATGTTCTTGTTTATGAGACTCCTTCTGCATCTGGTAGATACATTTGTGCTGAAAGTTCTCTGCACCGTGGTGAACTTGTTGAGATTCTTGCCAAGTATTTCCCTGAATACCCAATTCCTACCAAATGTTCAGATGAAAAGAACCCGAGAGTAAAACCCTACATATTTTCAAATCAAAAGCTGAAAGACTTGGGATTGGAATTCACCCCAGTGAAGCAGTGTTTGTATGAGACGGTTATGAATTTACAAGAGAAAGGCCACCTTCCTGTCCTCATAAACCAACAAGAGTTGATCTAA 1005 0.4567 MPAPADTSSVSGDIVCVTGAGGFIASWLVKLLLERGYIVRGTVRNPDDPKNGHLKELEGAKERLTLHKADLFDLDSLKAVFHGCDGVFHTASPVTDNPEEMLEPAVNGARNVVMAAAETKVQRVVFTSSIGTVYMDPNRSRDEVVDESCWSDLEYCKNTKNWYCYGKTVAEQVAWEAAKEKGVDLVVVNPVLVIGPLLQPTINASTIHILKYLTGSAKTYVNATQAYVDVKDAALAHVLVYETPSASGRYICAESSLHRGELVEILAKYFPEYPIPTKCSDEKNPRVKPYIFSNQKLKDLGLEFTPVKQCLYETVMNLQEKGHLPVLINQQELI* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2203 334 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 327 - -
Lja3g2203 334 Gene3D - 5 334 - -
Lja3g2203 334 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 327 - -
Lja3g2203 334 CDD FR_SDR_e 15 302 - -
Lja3g2203 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 315 IPR036291 -
Lja3g2203 334 Pfam NAD dependent epimerase/dehydratase family 15 246 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2203 Lja-Chr3 26132175 26136756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2203 10 278 Monolignol Biosynthesis Gene Families AT1G80820 76.208 3.72e-148 416