Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2169 ATGGGTGCGACTCTGCTGCCGGAGCTTGCGACGGAGATAGTGATCCCGGTGTGCGCCGTCGTAGGGATCGTCTTCTCGTTGGTGCAGTGGTTCCTGGTTTCGCGCGTCAAGCTTACATCTGAGACGTCGTCGTCGCCGCGCAACAACAAGAACGGTTACGGCGCCGAGTACCTGATTGAGGAGGAAGAAGGCATCAATGACCACAGCGTCGTCGCCAAATGCGCTGAGATACAGAACGCCATCTCTGAAGGTGCGTCGTCCTTTCTTTTCACTGAATATCAATATGTGGGGGTCTTCATGGTTGCTTTTGCAATCCTGATCTTCCTTTTCCTGGGCTCTGTGGAAGGCTTCAGTACTAAGGGCCAGCCCTGCACATATGATAAGAGCAAGCTTTGCAAGCCAGCCCTTGCAACTGCATTGTTTAGCACTGTGTCTTTCGTGCTTGGTGCTATCACTTCAGTCATATCTGGTTACCTTGGGATGAAAATTGCAACTTATGCCAATGCGAGGACAACCTTGGAAGCTAGAAAGGGAGTTGGAAAGGCTTTTATCACTGCATTCAGGTCTGGTGCAGTGATGGGTTTCCTTCTTGCAGCAAATGGTCTTTTGGTGCTCTACATTACTATCAATCTCTTCAAGCTTTATTATGGAGATGATTGGGCAGGTCTTTTTGAGGCTATCACTGGCTACGGTTTGGGTGGATCTTCCATGGCTCTGTTTGGGAGAGTTGGTGGTGGTATCTATACCAAGGCTGCTGATGTTGGTGCTGATCTGGTTGGAAAAGTTGAAAGAAATATCCCTGAGGATGATCCAAGAAACCCAGCTGTCATTGCAGACAATGTTGGTGATAATGTTGGAGATATTGCTGGGATGGGTTCTGACCTTTTTGGCTCATATGCTGAATCTTCTTGTGCTGCCCTAGTTGTCGCTTCCATTTCCTCATTTGGAATCAACCATGATTTCACCGCGATGTTATATCCCCTTCTCATCAGTTCTATGGGCATTCTTGTCTGTTTGATTACTACTCTCTTTGCAACTGATTTCTTTGAGATCAAGGCTGTCAAGGAAATTGAACCAGCATTGAAAAATCAGCTTATCATCTCCACAGCACTCATGACTGTTGGAATTGCAATTGTTAGTTGGGTTGCTCTGCCATCAACCTTCACAATTTTCAACTTTGGGGTTCAGAAGGAAGTAAAGAACTGGCAACTGTTCCTCTGTGTCGCTGTTGGTCTCTGGGCTGGACTTATTATTGGGTTTGTTACTGAATATTATACAAGCAATGCTTACAGCCCCGTACAAGATGTTGCTGATTCTTGCCGGACTGGGGCTGCAACCAATGTCATCTTTGGCCTTGCTCTGGGATACAAGTCTGTTATTATTCCTATTTTTGCCATTGCAATCAGCATTTTTGTGAGTTTTTCTTTTGCTGCAATGTATGGCATTGCTGTGGCTGCCCTTGGGATGTTGAGCACCATTGCGACTGGGTTGGCTATTGATGCTTATGGGCCTATCAGTGACAATGCGGGAGGTATTGCTGAGATGGCCGGCATGAGCCATCGTATCCGTGAGAGAACTGATGCCCTTGATGCTGCTGGAAACACCACTGCTGCCATTGGCAAGGGATTTGCTATTGGGTCTGCTGCGCTGGTGTCTTTGGCCCTATTTGGTGCTTTTGTCAGCAGGGCTGGAATTTCAACTGTTGATGTCCTGACTCCCAAGGTCTTCATTGGACTTATTGTTGGTGCCATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTAGGAAGTGCAGCTTTGAAGATGGTTGAGGAGGTTCGTAGGCAGTTCAACACCATCCCTGGAATCATGGAGGGTACCGCTAAGCCTGATTATGCTACCTGCGTCAAGATTTCTACCGATGCATCCATCAAGGAGATGATTCCTCCAGGTGCTCTTGTCATGCTCACTCCACTCATTGTTGGTATCTTCTTTGGTGTGGAAACGCTTTCTGGTGTTCTTGCTGGTTCTCTTGTTTCTGGCGTGCAGATCGCAATATCAGCATCCAACACTGGTGGTGCCTGGGATAATGCTAAGAAGTACATTGAGGCTGGTGCATCTGAGCATGCAAGGACCTTGGGCCCAAAGGGGTCTGACCCACACAAGGCAGCTGTTATTGGTGACACCATTGGAGACCCTCTTAAGGATACTTCTGGCCCTTCACTCAACATCCTTATTAAGCTCATGGCGGTTGAGTCACTTGTTTTTGCCCCATTTTTCGCAACTCATGGTGGCCTGCTTTTCAAGATCTGA 2298 0.4752 MGATLLPELATEIVIPVCAVVGIVFSLVQWFLVSRVKLTSETSSSPRNNKNGYGAEYLIEEEEGINDHSVVAKCAEIQNAISEGASSFLFTEYQYVGVFMVAFAILIFLFLGSVEGFSTKGQPCTYDKSKLCKPALATALFSTVSFVLGAITSVISGYLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYITINLFKLYYGDDWAGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDFTAMLYPLLISSMGILVCLITTLFATDFFEIKAVKEIEPALKNQLIISTALMTVGIAIVSWVALPSTFTIFNFGVQKEVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGIMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKI* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2169 765 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 1 765 - -
Lja3g2169 765 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 10 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja3g2169 765 Pfam Inorganic H+ pyrophosphatase 23 751 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja3g2169 765 PIRSF H+-PPtase 10 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja3g2169 765 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 765 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lja3g2169 765 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2169 Lja-Chr3 25458954 25463960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2169 5 629 Primary Pumps ATPases AT1G15690 89.348 0.0 1138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2169 K23025 - gmx:100803691 1405.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2169 3 25458954 25463960 Lja3g2169 3 25458954 25463960 ECH