Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2091 ATGATTCGAAACGGATGCATTGTGCACCAAGGGTATGCCCCTCTCAATACTAGGCCTTGCAGAGGTAGTAGCTCTGTCTTCAGTTGCGCTTCTCAACTGCCTGCTAAGGTTGCTGTTTCAAATATCCGGAGTTCATGGGGACATAGTTTGGAAAGTAAATCCTTGGTTCCTCGAGGAATTGCATTGTCAAACATGTCTAGTGCATCTAGCCTACTTTTAAGTGGGGGTCAAAACCTATTGTTTCGTACTGTCCCTGTGTTACCACCCAGGGTGCGCAAGTCTTCTATGGCCCCTCGAGCAGCGAAGGATGTACCGTCTAGCTTCCGTTTCCCTCCCATGACAAAAAAACCAAGATGGTGGTGGAGAACACTAGCATGCCTCCCTTACCTCATGCCTTTACATGAGACATGGATGTATGCAGAGACAGCGTACAACCTGCACCCGTTTTTGGAATTCTTTGAATTCTACACATACCCTTTTCTTATGGCAATTGGTAGCCTGCCGAGCTGGTTTCTCATGGCGTACTTTTTTGTTGCATATCTTGGAATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGGTTTCATGTGGTAATGGGAATGCTATTGGAGATAGCCCTGCAGGTTATAGGGACTGTGAGCCGTTGGATGCCATTGTCACTCTACTGGGGTAAACTAGGAATGCATTTCTGGACTGCTGTTTCTTTTGCTTATCTCTTTACTGTCATAGAGAGCATAAGGTGTGCTATTGTCGGTATGTATGCTGATATCCCTTTTATCTGTGACGCTGCATATATCCAAATTCCATATGATTAA 816 0.451 MIRNGCIVHQGYAPLNTRPCRGSSSVFSCASQLPAKVAVSNIRSSWGHSLESKSLVPRGIALSNMSSASSLLLSGGQNLLFRTVPVLPPRVRKSSMAPRAAKDVPSSFRFPPMTKKPRWWWRTLACLPYLMPLHETWMYAETAYNLHPFLEFFEFYTYPFLMAIGSLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSLYWGKLGMHFWTAVSFAYLFTVIESIRCAIVGMYADIPFICDAAYIQIPYD* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2091 271 PANTHER HIT-TYPE ZINC FINGER FAMILY PROTEIN-RELATED 23 271 - -
Lja3g2091 271 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 23 271 IPR005691 -
Lja3g2091 271 Pfam Chloroplast import apparatus Tic20-like 91 264 IPR005691 -
Lja3g2091 271 TIGRFAM 3a0901s05TIC20: chloroplast protein import component, Tic20 family 1 271 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2091 Lja-Chr3 24373622 24375215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2091 10 271 Chloroplast and Mitochondria Gene Families AT4G03320 37.234 5.04e-49 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2091 - - gmx:100818669 464.536