Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2063 ATGAACCGCCACCAGGGGCACCGATCCGGTGCGACGACGCGGCTCCACCACAACCGCCCCTGCTCCTCCGGCGACGACTTCCTCGACGCCTCCTCCAAGTGGCTCCGCTCCTCCTGCTCCTCCAATCACTTTCCTCCTCTTCAGGATTACAATTTGTACGGTGTGGAAGGAAGAATGTACAGCAGCAATACGCAGAGGAGTTTCAACATGGATTTCTCTGCGTCTCTCGGTGATTACATGAACGGCGGCGATGGTGAACAAGGTTTAAGCCCTGGCCTCTTGGATCTCCATTCAATTGATACAGACCTTCTTTCTGAGTTGCCGGCGGCTACCAATGGATATGATGCCTCGCTGTATCAACCTAATCGTGATGATTCTGAGCCTTACGTTTCCAACAAACGCAATGCTAGACCGCCGCTTCCTGAGAACAATGTCTCTGTTAATCTTTCTGCTGATAATGTGAAGTCTAGTTCTGTAGCCAAGATTAAAGTCGTGGTTCGCAAGAGGCCACTTAATAAGAAGGAATTAGCAAAGAATGAGGAAGATATTATAGAGGCGGTTTCGAATTCTTTAACAGTGCATGAGACAAAACTCAAGGTTGACCTAACTCAATACCTAGAGAAGCATGAATTTGTTTTTGATGCTGTCTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATCTTTCAACGCACTAAGGCAACCTGCTTTGCATATGGTCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCACTGCCACTTAAAGCATCAAGGGACATCTTGAAACTGATGTACCATACCTACAATAATCAGGGATTTCAGTTGTATGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGATCTCCTTAATGATCGAAAAAAACTATGCATGAGGGAGGATGGTAAACAGCAAGTCTGCATTGTTGGTTTGCAAGAGTACCGTGTATCGGATGTAGAGACTATTAAGGAACTGATTGAGCAAGGTAGTTCCACTAGAAGTACTGGCACCACAGGTGCAAATGAGGAATCTTCACGGTCACATGCAATACTTCAGCTTGCTGTCAAGAGATCAGTAGATGGAAATGGATCCAAGCCTCCCCGTCTTGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACTACAGATAATGACAAACAAACAAGAATAGAAGGTGCTGAGATCAATAAGAGCTTGCTCGCCCTAAAGGAATGCATAAGAGCTCTTGATAACGACCAAGGGCATATCCCATTTAGAGGCAGTAAATTGACTGAAGTTCTGAGGGATTCTTTTGTTGGCAATTCCCGCACGGTTATGATATCGTGCATATCACCAAGCTCTGGTTCATGTGAACATACACTCAATACATTAAGATATGCTGACAGGGTTAAAAGCCTATCAAAAGGGAACAATTCTAAGAAGGATATTTTATCTTCAAATATCAACCCTAGAGAATCAACTGCTATTCCCTTACCTTCTGTTACTACATATGCCTCTGTGGATCGGATGGCTAATACATGGACTGAAGAAAATGATGGGGATGATTTTAGTCCTCCTGAAGATTACTGTGAGCAGGTGAAACCAGCATGGAAGAGAAAGACCGAGCCATATGGTGCGATAGATGATAAATTGAAGAAACCTAATGGTCAGACTCAGATCAAATGGATGGACCTCCCAAAAGCTGGACCTAAAACAGTACATTCTAAGAAGGACATTTTATCTTCAAATATCAACCTTAGAGAATCAACGGCTATTCCCTTACCTTCTGTTACTACATATGCCTCTGTGGATCGGATGACTAATACATGGACTGAAGAAAATGATGGGGATGATTTTAGTCCTCCTGAAGATTACTGTGAGCACTTGAAACCAGCATGGAAGAGAAAGACCGAGCCATATGGTGCGATAGATGATAAATTGAAGAAACCCAATGGTCAGACTCAGATCAAATGGATGGACCTCCCAAAAGCTGGACCTAAAACAGTACATTCAGATGATGATTTAAATGCCCTCTTACAGGAAGAAGAAGACCTCGTAAATGCTCACCGGAAACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAAATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAGCTGGATGATTATATCACAAAACTGAATACCATTCTATCTCAGAAGGCTGCTGCCGTCATGGAGTTGCAGACCCGTTTAGCTAATTTCCAGAAACGTTTAAAGGAGCATAATGTTTTGGTCTCGTCTGCTGGTTAA 2316 0.4326 MNRHQGHRSGATTRLHHNRPCSSGDDFLDASSKWLRSSCSSNHFPPLQDYNLYGVEGRMYSSNTQRSFNMDFSASLGDYMNGGDGEQGLSPGLLDLHSIDTDLLSELPAATNGYDASLYQPNRDDSEPYVSNKRNARPPLPENNVSVNLSADNVKSSSVAKIKVVVRKRPLNKKELAKNEEDIIEAVSNSLTVHETKLKVDLTQYLEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILKLMYHTYNNQGFQLYVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVETIKELIEQGSSTRSTGTTGANEESSRSHAILQLAVKRSVDGNGSKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDILSSNINPRESTAIPLPSVTTYASVDRMANTWTEENDGDDFSPPEDYCEQVKPAWKRKTEPYGAIDDKLKKPNGQTQIKWMDLPKAGPKTVHSKKDILSSNINLRESTAIPLPSVTTYASVDRMTNTWTEENDGDDFSPPEDYCEHLKPAWKRKTEPYGAIDDKLKKPNGQTQIKWMDLPKAGPKTVHSDDDLNALLQEEEDLVNAHRKQVEETMNIVREEMNLLVEADQPGNQLDDYITKLNTILSQKAAAVMELQTRLANFQKRLKEHNVLVSSAG* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2063 771 ProSiteProfiles Kinesin motor domain profile. 161 484 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g2063 771 SMART kinesin_4 159 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g2063 771 MobiDBLite consensus disorder prediction 114 146 - -
Lja3g2063 771 Coils Coil 690 721 - -
Lja3g2063 771 CDD KISc_KIF2_like 161 482 - -
Lja3g2063 771 PRINTS Kinesin heavy chain signature 241 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g2063 771 PRINTS Kinesin heavy chain signature 350 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g2063 771 PRINTS Kinesin heavy chain signature 434 455 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g2063 771 PRINTS Kinesin heavy chain signature 384 402 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g2063 771 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 484 IPR027417 -
Lja3g2063 771 ProSitePatterns Kinesin motor domain signature. 383 394 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja3g2063 771 PANTHER KINESIN-RELATED PROTEIN 6 3 586 - -
Lja3g2063 771 Pfam Kinesin motor domain 167 483 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g2063 771 MobiDBLite consensus disorder prediction 339 359 - -
Lja3g2063 771 Coils Coil 746 766 - -
Lja3g2063 771 MobiDBLite consensus disorder prediction 1 22 - -
Lja3g2063 771 PANTHER KINESIN-LIKE PROTEIN KIN-13B 582 771 - -
Lja3g2063 771 PANTHER KINESIN-LIKE PROTEIN KIN-13B 3 586 - -
Lja3g2063 771 Gene3D Kinesin motor domain 142 487 IPR036961 -
Lja3g2063 771 PANTHER KINESIN-RELATED PROTEIN 6 582 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2063 Lja-Chr3 23947774 23954500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2063 160 484 Calmodulin-binding Proteins AT5G65930 33.731 6.04e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2063 K10393 - gmx:100802651 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2063 3 23947774 23954500 Lja3g2063 3 23947774 23954500 ECH