Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2034 ATGATGGCTGGGAACCCTAACTGGTGGAGTGTGAATCCACCATCTTTGATCCCTTCTTCTCAGTATGCAATTGGATCTTCTTCAAATCCTTTTAGTTCTTTGAATGAAAACCTGGAGCCCCATCAGTCATTGAGTCAACTTCTTTTTACTGGATTACCAGGAGAAGAAGAGAGAGTTGCATTTAGTCATTTTCAGCCAAAAAAGATGGAAAACTGGGATGAACATATTATTAACACATCCTCCATGGTTCCTCTTGTTGATGTAATAAAGCATGAAGTTTCTCGAAGTGGCAACAACTTATATCACCCTGGGCATGGGGAATTTCAGGTTCCTGGAGCAACTTGGTCAAATATGGTGACAGTTTCTTCACCTAGGTCAAGTTCTGTTACTAGCTTGAGTAGTAATAATTTATTGGATTTCACTTATAATAACAAGGTCGATCATAGGAAGATTAACCAACTCCCAGATCACACATCTGAGTGTAATAGCAAAGCCACTGGTGGAGTTTGTAAGAAGACAAGGGGTCAGCCATCTTCAAGCCAACCACCTCTGAAGGTGAGAAAGGAGAAGCTAGGTGATAGAATAACATCCCTTCACCAGCTGGTTTCCCCGTTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCAATTGGATATATCAGATTCCTGCAAGGTCAAATTGAGGCACTCAGTTCTCCTTACTTGGGTAATGGATCAAAAAACATGAGGAATCAACAATATGTACATGGAGAAAGAAATGCTGTATTTCCTGAGGACCCCGGTCAGCTGTTAAATGATTCTGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGGAGATAGGCCAAAAGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCAGTCTCTTGTACCCAACATGTTGGAAATGAAAATGGAGCTGATTACTGGGCACCTGGATATGGCGTCGGTGGATTTTAA 963 0.4216 MMAGNPNWWSVNPPSLIPSSQYAIGSSSNPFSSLNENLEPHQSLSQLLFTGLPGEEERVAFSHFQPKKMENWDEHIINTSSMVPLVDVIKHEVSRSGNNLYHPGHGEFQVPGATWSNMVTVSSPRSSSVTSLSSNNLLDFTYNNKVDHRKINQLPDHTSECNSKATGGVCKKTRGQPSSSQPPLKVRKEKLGDRITSLHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNQQYVHGERNAVFPEDPGQLLNDSGLKRKGAPNQDGDRPKDLRSRGLCLVPVSCTQHVGNENGADYWAPGYGVGGF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2034 320 Gene3D - 185 247 IPR036638 GO:0046983
Lja3g2034 320 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 175 224 IPR011598 GO:0046983
Lja3g2034 320 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 185 236 IPR036638 GO:0046983
Lja3g2034 320 MobiDBLite consensus disorder prediction 155 185 - -
Lja3g2034 320 PANTHER OS05G0228400 PROTEIN 19 306 - -
Lja3g2034 320 MobiDBLite consensus disorder prediction 256 286 - -
Lja3g2034 320 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 19 306 - -
Lja3g2034 320 CDD bHLH_AtbHLH_like 185 232 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2034 Lja-Chr3 23701529 23705667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2034 54 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 47.598 2.73e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2034 - - gmx:100802121 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2034 3 23701529 23705667 Lja3g2034 3 23701529 23705667 ECH