Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1992 ATGATGAACAAGAACATGAATAGCAGAGATGCACTTGTTCTTCTACTCTCTGCATTTGTCTTTCTCACTTGTGGTGGGAATGCACAGGATACACTTGTACCAGCAATCATGACATTTGGTGACTCTGCTGTTGATGTTGGAAACAATGACTATCTTCCCACAATTTACAAGGCTAATTACCCTCCTTATGGGAGGGACTTTGTTACACACCAACCTACTGGGAGGTTTTGCAATGGGAAGTTAGCTACTGATATAACTGCTGAAACACTGGGTTTTAAGAGCTTTGCACCTGCATATCTTAGTCCACAGGCATCAGGGAAGAACCTCCTTATTGGAGCAAACTTTGCTTCAGCTGCTTCTGGTTATGATGAAAAGGCTGCTATGTTGAATCATGCAATTCCATTGTCTCAACAGTTAGATTATTTCAAGGAATATCAAAGCAAGCTAGCCAAGGTAGCTGGCAGTAAAAAGGCAGCCTCAATTGTTAAGGATGCATTGTACTTATTGAGTGCTGGCAGCAGTGACTTTGTACAAAACTATTACATCAATCCTTGGATCAACAAAGTCATCACTATTGATCAGTATTCATCTTACCTGGTGGATTCATTCACAACCTTTATTAAGGGCTTGTATGGATTAGGAGCAAGGAAAATTGGAGTGACTTCACTCCCACCATTGGGTTGTCTACCTGCTGCAAGGACCTTATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGATTCAACACTGATGCCCAAGCATTTAACAAAAAGATCAACTCAGCTGCAGCAAAACTCCAAAAACAACATCCTGGTCTTAAGATTGTGATTTTTGATATTTACAAGCCTCTCTATGACCTTGTTCAGACCCCTTCAAATTTTGGCTTTGCAGAGGCAAGGAGAGGTTGCTGTGGTACAGGGACTGTAGAGACGACATCCTTGTTGTGCAATCCAAAATCAATAGGAACTTGTTCTAATGCAACACAATATGTGTTTTGGGACAGTGTCCATCCTTCAGAAGCTGCCAACCAAGTTCTAGCTGATGCACTGATTTTACAAGGAATAGCTCTTATAGGATAA 1077 0.4113 MMNKNMNSRDALVLLLSAFVFLTCGGNAQDTLVPAIMTFGDSAVDVGNNDYLPTIYKANYPPYGRDFVTHQPTGRFCNGKLATDITAETLGFKSFAPAYLSPQASGKNLLIGANFASAASGYDEKAAMLNHAIPLSQQLDYFKEYQSKLAKVAGSKKAASIVKDALYLLSAGSSDFVQNYYINPWINKVITIDQYSSYLVDSFTTFIKGLYGLGARKIGVTSLPPLGCLPAARTLFGFHENGCVSRFNTDAQAFNKKINSAAAKLQKQHPGLKIVIFDIYKPLYDLVQTPSNFGFAEARRGCCGTGTVETTSLLCNPKSIGTCSNATQYVFWDSVHPSEAANQVLADALILQGIALIG* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1992 358 CDD SGNH_plant_lipase_like 34 350 IPR035669 -
Lja3g1992 358 Gene3D SGNH hydrolase 26 353 IPR036514 -
Lja3g1992 358 SUPERFAMILY SGNH hydrolase 129 349 - -
Lja3g1992 358 Pfam GDSL-like Lipase/Acylhydrolase 36 348 IPR001087 GO:0016788
Lja3g1992 358 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 356 - -
Lja3g1992 358 PANTHER GDSL ESTERASE/LIPASE EXL3 5 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1992 Lja-Chr3 23026353 23028744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1992 6 350 Pollen Coat Proteome AT1G75910 35.632 9.04e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1992 - - rcu:8281615 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1992 3 23026353 23028744 Lja3g1992 3 23026353 23028744 ECH