Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1981 ATGATCAAGAACAGAGAGTCTGCAGCTAGGTCCAGGGAACGAAAACAGGCTTACACTACTGAGCTTGAGGCTATCCTTCAGCAACTCGAGGAGGAGAATGCGCGATTAATGGAAGAAGAGGCGGAGAGGAACAAGCAGAGGCTCAAGCAGCTCAGAGAGTGCCTCATTCCAATTGTGGAGAAACCGAAACCAAAACGGAAACTCCAGAGATCAAATTCAGTTTAA 225 0.4756 MIKNRESAARSRERKQAYTTELEAILQQLEEENARLMEEEAERNKQRLKQLRECLIPIVEKPKPKRKLQRSNSV* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1981 74 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 74 IPR043452 GO:0003700|GO:0045893
Lja3g1981 74 Pfam bZIP transcription factor 1 52 IPR004827 GO:0003700|GO:0006355
Lja3g1981 74 Gene3D - 1 56 - -
Lja3g1981 74 PANTHER OS05G0437700 PROTEIN 1 74 - -
Lja3g1981 74 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 1 46 IPR004827 GO:0003700|GO:0006355
Lja3g1981 74 Coils Coil 8 54 - -
Lja3g1981 74 SUPERFAMILY Leucine zipper domain 1 47 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1981 Lja-Chr3 22838650 22841380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1981 1 74 bZIP Transcription Factor Family AT1G03970 61.333 4.21e-22 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja3g1981 bZIP_1 5.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1981 K14432 - ini:109165418 90.8929