Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1972 ATGCTCGTGGTGGATGCGACTGGAAATCCCAGATCTGGCCACCATCATCAGTTAAATCCCTATCTTCACAATCCTTCTCTGATTTGGAACTATTACATTGTTTTCCTGGGAGCTCATCCTGTGAGTAGAGATATAGCACTAGAGACCCATTTAAATATTCTTTCAGCTGTTAAAGGAAGCCACCTTGAAGCCAAAGATTCTATTGTATACAGCTACACACACAGCTTTAGTGCATTTGCTGCTAAATTGTCTGACGGTGAAGCCAAGAAATTATCTGCCATGGATGAAGTGCTATCAGTATTACCAAATCAGTACCGTAAGCTGCACACAACAAGGTCATGGGACTTTATTGGCTTACCTTTGACTGCTAAGAGAAAACTGAAATCAGAGAGTGACACAATTGTGGCTCTTTTGGATACAGGGATCACTCCTGAGTTTCAAAGCTTCAAGGACAATGGATTAGGTCCTCCACCTACTAAATGGAAAGGAACTTGTGACCAATATGCTAATTTCTCAGGCTGCAATAACAAAATAATAGGAGCCAAATATTTCAAGATTGATGGAAGGCCTGATCCATCTGAGATTTTATCTCCCATAGATGTGGATGGCCATGGCACACACACGGCATCAACAGCAGCAGGTAATCATGTCCCAAATGCAAGTCTCTTCGGGTTGGCCAAAGGGACTGCTCGAGGCGCAGTGCCCTCAGCCAGGTTGGCAATTTACAAAGTCTGCTGGAGAATTGATGGATGTGCAGACATGGACATACTTGCTGCATTTGAAGCTGCTATACATGATGGAGTGGATGTCATATCCATTTCCATTGGTGGAGGGATTGCAAATTTTGTACAGGACTCTATAGCAATCGGAGCATTTCATGCGATGAGGAGAGGCATCATCACTGTGGCCTCAGCTGGAAATGATGGTCCAGCTATGGCAACTGTCTCAAATAACGCGCCATGGATTGTAACAGTAGCTGCTAGTGGAATTGATAGGGATTTCCAGAGCACTATAAGGTTGGGGAGTAGGAAAAATGTTTCAGGGGCAGGAGTGAGCACCTTCAATCAAAAACAAAAACAGTACCCCGTTGTTATGGGTATGGATGCAGCCAGAAACTCATCAAGCAAGGAAAATGCTAAGTTCTGCTTTCAAGATTCCTTAGAGCCAAATAAGGTAAAAGGAAAGATTCTATATTGTAGATTTGGAACATGGGGCACTGAAGCTGTCATAAAAGCAATTGGAGGCATTGGTACTATAGTTGAAAATGAGGAAGTTCGAGATGTTGCTCAAATATTCATGGCTCCTGCAACAATTGTGAATAGTAGCATAGGTCAAGTTATTACCAATTATATTCAATCCACAAGATCACCATCAGCAGTGATAGATAAGAGCCACGAAGTAAAAATACCAGCTCCGTTTGTTGCTTCATTTTCATCTAGGGGTCCAAATCCATTATCCCAACATGTTCTCAAGCCTGATGTTACAGCTCCTGGCATAAATATCTTGGCATCTTATACACTTATGAACTCAGTTACTGGTTTAAAAGAAGACACACAATTTTCAGAATTTACACTAATGTCTGGGACTTCTATGTCATGCCCTCATGTTTCTGGAGTAGCAGCATATGTGAAGTCATTTCATCCAGATTGGACTCCTGCTGCAATCAGATCTGCCATTATTACCACAGCTAAACCTATGAGCCATAGAGTTAACAAGGAGGCAGAATTTGCCTTTGGTGCTGGTCAAGTGAACCCTACAAGAGCTGTGAACCCTGGTTTGGTCTATGAAATGGATGACTTTGCTTATATCCAGTTCTTATGCCATGAGGGCTATAATGGTTCTACTTTATCAGTGTTAGTTGGATTTCCTGTAAACTGCTCCTCTTTGCTTCCTGGGCTTGGATATGATGCTATCAACTATCCAAGCATGCAACTAAGTGTGAAAAGCAACAGAGGCCTTACAGTAGGAGTTTTCAGGAGAAGAGTGACTAATGTAGAAGTAGTAGATGTGACCATCAAGTCTCCTAAAGGAGTGGAAATCACAGTGAAGCCAACTAACCTCATTTTCTCTAAGACCTTGCAGAAGAGGAGCTTCAAGGTAGTGGTGAAAGCAAAATCTATGGCTAGAATGCAAATTGTATCAGGTTCTCTTATTTGGAAAAGCCCCCATTACATTGTTAGGAGCCCTATTGTTATCTACAGTCCATAA 2208 0.4203 MLVVDATGNPRSGHHHQLNPYLHNPSLIWNYYIVFLGAHPVSRDIALETHLNILSAVKGSHLEAKDSIVYSYTHSFSAFAAKLSDGEAKKLSAMDEVLSVLPNQYRKLHTTRSWDFIGLPLTAKRKLKSESDTIVALLDTGITPEFQSFKDNGLGPPPTKWKGTCDQYANFSGCNNKIIGAKYFKIDGRPDPSEILSPIDVDGHGTHTASTAAGNHVPNASLFGLAKGTARGAVPSARLAIYKVCWRIDGCADMDILAAFEAAIHDGVDVISISIGGGIANFVQDSIAIGAFHAMRRGIITVASAGNDGPAMATVSNNAPWIVTVAASGIDRDFQSTIRLGSRKNVSGAGVSTFNQKQKQYPVVMGMDAARNSSSKENAKFCFQDSLEPNKVKGKILYCRFGTWGTEAVIKAIGGIGTIVENEEVRDVAQIFMAPATIVNSSIGQVITNYIQSTRSPSAVIDKSHEVKIPAPFVASFSSRGPNPLSQHVLKPDVTAPGINILASYTLMNSVTGLKEDTQFSEFTLMSGTSMSCPHVSGVAAYVKSFHPDWTPAAIRSAIITTAKPMSHRVNKEAEFAFGAGQVNPTRAVNPGLVYEMDDFAYIQFLCHEGYNGSTLSVLVGFPVNCSSLLPGLGYDAINYPSMQLSVKSNRGLTVGVFRRRVTNVEVVDVTIKSPKGVEITVKPTNLIFSKTLQKRSFKVVVKAKSMARMQIVSGSLIWKSPHYIVRSPIVIYSP* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1972 735 Gene3D - 606 734 - -
Lja3g1972 735 Pfam Fibronectin type-III domain 638 732 IPR041469 -
Lja3g1972 735 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 31 733 - -
Lja3g1972 735 CDD Peptidases_S8_3 107 563 IPR034197 -
Lja3g1972 735 SUPERFAMILY Subtilisin-like 108 593 IPR036852 GO:0004252|GO:0006508
Lja3g1972 735 Pfam Peptidase inhibitor I9 32 109 IPR010259 -
Lja3g1972 735 ProSiteProfiles Serine proteases, subtilase domain profile. 113 589 - -
Lja3g1972 735 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Lja3g1972 735 Gene3D - 331 467 - -
Lja3g1972 735 CDD PA_subtilisin_like 337 461 - -
Lja3g1972 735 Gene3D Peptidase S8/S53 domain 132 599 IPR036852 GO:0004252|GO:0006508
Lja3g1972 735 Pfam Subtilase family 131 581 IPR000209 GO:0006508|GO:0008236
Lja3g1972 735 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 109 IPR037045 -
Lja3g1972 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 733 IPR045051 -
Lja3g1972 735 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Lja3g1972 735 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Lja3g1972 735 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1972 Lja-Chr3 22629944 22639753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1972 30 577 Subtilisin-like Serine Gene Family AT4G00230 64.599 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1972 - - ccaj:109800351 1209.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1972 3 22629944 22639753 Lja1g3166 1 38787777 38793136 PCT