Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1891 ATGGCCATTGGGAGCCCAAAGCATGAGAAGAAGATGCAGGAAAAGAACCTGAGTGCACAACTAGCTGTTGCAGTCAGAAGTATTCAATGGAGCTATGGAATTTTCTGGGCACCTTCAACCACTCAACAAAGAGAACTGGAATGGAGGGATGGGTACTACAATGGAGACATTAAGACAATGAAGACAGTGCAAACCATGGAAACTAAGGCTGATAAAATAGGCCTGCAGAGGAGTGAACAACTGAGAGAACTATACAAGTTTCTTCTTGTAGGTGAAGCTGACCCACTAGCTAAAAGACCTTCTGCTTCATTATCTCCAGAGGATCTCTCAGATTCAGAGTGGTATTACTTGGTTTGCATGTCCTTTGTGTTCTACCCCAACCAAAGTTTGCCTGGAAAAGCACTAGAAACTGGTGAAACAGTGTGGCTATGCAATGCTCAGCAGGCAGATAGTAAATTTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCCTCTATTCAGACAGTGGTGTGTTTTCCCTATCTTGGAGGTGTCATTGAGATAGGAACAACTGAACTGGTATCTGAGGATCCTAATCTCATTCAACATGTGAAGGCATGCTTCTTAGAAATCTCAAAGCCTACATGTTCTGATAAATCATCCTCTGCCCATGACAAACCACATGATGACAACAAATATCCAACATGCACCAAGGGTGACCATGAGGTTTTAGACAAAATTCCCATGGAGAACTCATGTTCCTTTGCAGAAGAACTCAAATTTGATGAATATCCTGGCAGGGAGTTACAAGATGATGATAACAATGAAGATTGTGACATGGATGGATTCTCTGATGGTGGTTGTGATCATTATGAATCCATGATAGAGGGCATCAACGAGGGTGGTTCTTCTCAAGTTCATTTTGTGAATGAAGGTGGTGACATCAATGGTGCCCCAGATTCCTCTAGTTCTTGTGATTGTAGGTCTGAGGCTTCTGAGAACCATGGTAAGAAGGATTCTAAAAATGTAATCCAAATTCAACAAAAGGAGCTTCAAGACTGTGATGATAACTCAAAAAGTAGCTCTTTGGATATTGGAGCTGATGAAGTTTTGTACTACACAAGAACTCTCTGTGCTGTTCTGGGAAATTCATCAAGTTTTGCACAAAATCTATGTGCAAGTAAATCTAGTTTTGTGAAATGGAATAAAGGAGGAGTTTCTGAAAGGAAGTGGCCGCGGTTGCAACAAATGATGTTAAAGAAGACTTTGTTTGATGTCCCTTTTATGCACCTAAGTTGCTCCTCTCTCAAATTACAAAAAGAAAATGGAAGAAAAGAATGGACTTCTAAATTGGAAAATGCTGATAATTTCATGGGGAATGTCTTCTCTGATAAGAAAAGAGAATCTAGAAACATTCAGGTACTCAAATCTGTGGCTCCTTCTGCATGTGAGGTGGAGAAGATTTCAGTTCTTGGTGACACAATTCAATACTTGAAAAAGCTTGAGGCAAGAGTGGAAGAACTAGAATCTTACATGGACACTACAGCTACTGGAGCAAGAACCAGAAGAAAATGCCCAGATGTGCAAGAGCAGATATCAGATAGCTATGGCCCCAGTAATATTTACATGGGAATGAAAAAATCTAGGATAAACAAGAGGAAGGCTTGTGATATTGATGACATAGACACAGGGCTAGACATGATTGTTTCTGAAGAAGATAAGCCATTGGATGTGAAAGTCAACATGAAGGAGGAAGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATATTGTATGATATCATGGATGCCATAAGCAATCTGCATATAGATGCACACACAGTTGATTCATCAACAGCTGATGGTGTTCTCACATTTAAACTTAAATCCAAGTTTCGAGGAGCAGCAACTGCGCCAGTGCGGATGATCAAAGAAGCACTCTGGAAAGTATCTGGAAAGATTTGA 1947 0.4047 MAIGSPKHEKKMQEKNLSAQLAVAVRSIQWSYGIFWAPSTTQQRELEWRDGYYNGDIKTMKTVQTMETKADKIGLQRSEQLRELYKFLLVGEADPLAKRPSASLSPEDLSDSEWYYLVCMSFVFYPNQSLPGKALETGETVWLCNAQQADSKFFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVSEDPNLIQHVKACFLEISKPTCSDKSSSAHDKPHDDNKYPTCTKGDHEVLDKIPMENSCSFAEELKFDEYPGRELQDDDNNEDCDMDGFSDGGCDHYESMIEGINEGGSSQVHFVNEGGDINGAPDSSSSCDCRSEASENHGKKDSKNVIQIQQKELQDCDDNSKSSSLDIGADEVLYYTRTLCAVLGNSSSFAQNLCASKSSFVKWNKGGVSERKWPRLQQMMLKKTLFDVPFMHLSCSSLKLQKENGRKEWTSKLENADNFMGNVFSDKKRESRNIQVLKSVAPSACEVEKISVLGDTIQYLKKLEARVEELESYMDTTATGARTRRKCPDVQEQISDSYGPSNIYMGMKKSRINKRKACDIDDIDTGLDMIVSEEDKPLDVKVNMKEEEVLIEMKCPYREYILYDIMDAISNLHIDAHTVDSSTADGVLTFKLKSKFRGAATAPVRMIKEALWKVSGKI* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1891 648 PANTHER TRANSCRIPTION FACTOR MYC1 10 647 - -
Lja3g1891 648 PANTHER TRANSCRIPTION FACTOR TT8 10 647 - -
Lja3g1891 648 MobiDBLite consensus disorder prediction 295 321 - -
Lja3g1891 648 MobiDBLite consensus disorder prediction 295 334 - -
Lja3g1891 648 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 17 200 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1891 Lja-Chr3 21689928 21695444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1891 15 645 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 39.398 1.38e-122 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1891 - - gmx:100783746 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1891 3 21689928 21695444 Lja3g1891 3 21689928 21695444 ECH