Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1885 ATGGCAAAGAAGTCCCAAAGACGCCAAATCCGGTATGAGAAAGATAAAGCAGGCTGTATGTGGGGTTTTATTAGTATGTTTGATTTTCGCCACGGTCACCCCACTCGGAAGCTGATTGCAGACAAGAGAAGAAGCAGCAAGCATGCTGTTGGTGTTGTACATTCTAAGAACAAGTTTGAGATGTTGAGCAATATGGATGAAGATGGTCAAGGCTGTTCTGACAGTGGACAGAGTAAAAGACCGACAGTGAGAGCTGCTTCTACCAAGCCAAGTGTGAAGAAACTCATTGAAGAAGAGATGTTCATTGACCAAAATGCAATGAAGGAAAAAGATAAGGCTCAAGTAGAATCAAAGGAGTCCAGGTTAAGGCGTGAAGTCTTCCTCAAGTTAGATTCCAAAAGAAATAAGAAATCTTTTGAGAAAGACCGTGATATCACCAGAGATTCAAATTTGGATGAAACCTTGAAATCTCAAATCTCAAATCGTCAGCATTCAAGGAAGCAATCTAAAGATAATCTTGATCTGGAAAAGATAATTGAAGAGTTCTGTCATCTAGAAGGTGTTTGCTCCATGGTGCATGGCAACAATAGAGGAGTAGAAGTTCATTCGGAATCAAACCACATGCATGATATTTCTGAAAACAATGCTAGAGCTGCAATTATTGAACTTGTGAATCAGATGATAAATAACGGCAAAGATGTGGCAGAAGCTAGAAAATTCCTTTGCTCCCATGAACTAATGGAAGCACTTCAGCTCATAAGTTCAGATAAGGAATTGTTAAATACACTTATATTGAAATGTATTCAAGAGTTTGGGAATTCTCAGGGGGAAAATGACAAAGAATGTAGTTGTCTTGCTGGTTCCAACTTTTCTGAACAAGATCATGGAAATCTGGAGCAAACTAGGGACATCGTCAACCATAAGAAGCATAATTTTTTCAGGAAAAAAGTAAAGTCTCAATCAAAAAGTTCAACAAATGAAAATGGGAATACTGACTTTCCAAATAGAATTGTTGTTCTGAAGCCTGGAAACCACCTTTCCTCATCCCTGGATTCTCATGATACTGTCGAATATGACGGTCCTTCGGTGAAAGGTAGTTCACATTTTTCTCTTTCTGAGATAAAAAAGAAATTAAAGCATGCTATGGGAAAGGAAAGACATGGAAACCTTGAAGGGGTCTCAAACAAGGGGCTTAGGACCAAATCCATGGCTAAAAACAGTGTTGGAATGAGATCTCCTAATAAAGATCATTTCTTCATTGAAAAAATTTCTAGACCTACGACCGGTGTTATGAAAGGAGACAAGACTGTTGCAAATAAAGATTCTGAACTGATTGTAGAAAATGAAAAGGGTTTTTACCCTAAACAAGGGGCTTCTAACTTATACATAGAGGCTAAGAAACATCTGTATGAGATGGTAGGTAATGGAGATAAGAGCATAGACTTGTCAAGTAGGCAGAGTTCCAAAAGCCTTGGGAGAATACTATCTCTTCCTGAGTATAACTTTTCTCCCTTTGGCAGTCCTGGAAGGGATTGGGAGCAACATTTTGTGACTGCACAGACAAGATTTTCTACTTCAGATAAAATTAGGGAGGTGAGTAAGGATAATTTGTCTCCCGAGCAAGCAACCTTTGGTGGTGGTATGGATCAAGAAACAGGCAATGCAGAGAATCTGGCAAGTATTTGTGATGAAAGCTCTAGTAATAAAGTACAAGAAGTTAAGTCAGAGTCGAATTTCTCAGATGAGCTTAGTCATGTTGATAAAGAGGAGAATTATTGTCATGTTAGAGATGAGATTGTTGCTGAAGAATCTGTAAAAGAGATAAACGTTTTGGAATCTTCCTCAGAACCAGTTGGAAACAGTGCACTAAAGGAGGAGCAAAACTATGATGAGTCAGAAGTTCCCGATAGTGCAAGATGTTCTAAATGTTTGAAGCAGGATGTAACAGAAGAAAACCAACCATTGTCTCCACAGTCATCCCCATCCCACTCTTCCATCACAAAGAAAATTAAAGAGCTAGAATGTGTTGCGGACGTATCTGGACGGCCCAGTCCTGTTTCTGTTCTTGATACCCCATTCTTAGAGGATGATGTCAAACCTGGGTGCTCCAGATTTCAAACTGTTGAAGTACCAGTACCGCCACTACATATCCAATTTGAAGAACAAGATTCTTCACCTGTGAATCAAACAGATAGAGCAAAATATTGTTTTGAAGAAAATGAGTTGATATATGACTACATTAAAGCCGTCATGCAAGCCTCTGGATTGACTAGAGACCAGTTGTTGATGAAATGTCTTTCCTCAGATAAGATACTAGATCCTTCATTGTTTGATCAGGTAGAGTCTTTACCAAACCAAGTTTGCCGTGATCCGAAGCTCCTATATGACTGTATCAACGACATTCTCACGGAGGTTTGTTGCCATTACTTCGGGGCCTCACCTTGCGTATCATTTGTCAGTCCTGGCATAAGACCAACTCCAAATATGAAAAGAGTCAATCTCAAGGTCTGGGAAGGAGTGTGCTGGCTTCTCCTTCCCTTGCCCCCACCACACACCTTGGACAAAATTGTTAGGAAAGACATGGAAAAAACTGGAGCATGGATGGACCTTCGATTCGAAGCTGAAACAGTCGGTTTCGAAATGGGCGATGACATTCTTGATGACTTGATGGAAGATGCAGTACTGAGCTGTGTAAGCAAAAGTGACGGAAGTGAATGTTCTCAGCTTCAATTTGAGTTTAATGACAACAAGAGCAGCACCAATATGTAA 2769 0.3991 MAKKSQRRQIRYEKDKAGCMWGFISMFDFRHGHPTRKLIADKRRSSKHAVGVVHSKNKFEMLSNMDEDGQGCSDSGQSKRPTVRAASTKPSVKKLIEEEMFIDQNAMKEKDKAQVESKESRLRREVFLKLDSKRNKKSFEKDRDITRDSNLDETLKSQISNRQHSRKQSKDNLDLEKIIEEFCHLEGVCSMVHGNNRGVEVHSESNHMHDISENNARAAIIELVNQMINNGKDVAEARKFLCSHELMEALQLISSDKELLNTLILKCIQEFGNSQGENDKECSCLAGSNFSEQDHGNLEQTRDIVNHKKHNFFRKKVKSQSKSSTNENGNTDFPNRIVVLKPGNHLSSSLDSHDTVEYDGPSVKGSSHFSLSEIKKKLKHAMGKERHGNLEGVSNKGLRTKSMAKNSVGMRSPNKDHFFIEKISRPTTGVMKGDKTVANKDSELIVENEKGFYPKQGASNLYIEAKKHLYEMVGNGDKSIDLSSRQSSKSLGRILSLPEYNFSPFGSPGRDWEQHFVTAQTRFSTSDKIREVSKDNLSPEQATFGGGMDQETGNAENLASICDESSSNKVQEVKSESNFSDELSHVDKEENYCHVRDEIVAEESVKEINVLESSSEPVGNSALKEEQNYDESEVPDSARCSKCLKQDVTEENQPLSPQSSPSHSSITKKIKELECVADVSGRPSPVSVLDTPFLEDDVKPGCSRFQTVEVPVPPLHIQFEEQDSSPVNQTDRAKYCFEENELIYDYIKAVMQASGLTRDQLLMKCLSSDKILDPSLFDQVESLPNQVCRDPKLLYDCINDILTEVCCHYFGASPCVSFVSPGIRPTPNMKRVNLKVWEGVCWLLLPLPPPHTLDKIVRKDMEKTGAWMDLRFEAETVGFEMGDDILDDLMEDAVLSCVSKSDGSECSQLQFEFNDNKSSTNM* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1885 922 MobiDBLite consensus disorder prediction 533 553 - -
Lja3g1885 922 MobiDBLite consensus disorder prediction 536 553 - -
Lja3g1885 922 MobiDBLite consensus disorder prediction 64 90 - -
Lja3g1885 922 MobiDBLite consensus disorder prediction 68 85 - -
Lja3g1885 922 PANTHER (, RELATED) 1 909 - -
Lja3g1885 922 MobiDBLite consensus disorder prediction 315 335 - -
Lja3g1885 922 Pfam Protein of unknown function (DUF3741) 225 260 IPR022212 -
Lja3g1885 922 MobiDBLite consensus disorder prediction 612 638 - -
Lja3g1885 922 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 909 - -
Lja3g1885 922 MobiDBLite consensus disorder prediction 318 333 - -
Lja3g1885 922 Pfam Domain of unknown function (DUF4378) 745 892 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1885 Lja-Chr3 21607870 21613957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1885 1 880 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.150 3.61e-99 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1885 - - lja:Lj3g3v2330870.1 1836.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1885 3 21607870 21613957 Lja3g1885 3 21607870 21613957 ECH
Lja1g3087 1 37563419 37568994 Lja3g1885 3 21607870 21613957 PCT