Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1877 ATGGAAACTTGTACGGCTATACTACTTTTAACGGCGATTACGGTTTACCTGCTATGGTTCACGTTCATCTCACGGTCACTGAGAGGTCCACGTGTCTGGCCCTTATTGGGCAGCCTCCCGGGTCTCATCGAGAATTGTGACCGCATGCATGACTGGATCTGCGATAACCTCCGCGCGTGCGGCGGCACGTACCAAACCTGCATCTGCGCCATCCCCTTTCTGGCGAAGAAGCAAGGTCTCGTGACTGTCACGTGCGACCCGAGGAATCTGGAGCACATTCTCAAGACCCGGTTCGATAACTACCCGAAGGGTCCCACATGGCACGCGGTGTTTCACGATCTTCTCGGCGACGGGATCTTCAACTCCGACGGGGATACGTGGTTGTTTCAGCGCAAAACCGCCGCGCTGGAATTTACCACGAGGACGCTGCGCCAAGCCATGGCTCGCTGGGTGAGCCGAGCCATTAAGGATCGGCTCTGCAAGGTGCTGAAACAAGCCGAGCTGAAAGCGGAGGCGGTGGATCTGCAGGATCTGATGCTGAGGCTCACGTTTGACAACATTTGTGGACTGGCCTTTGGGAGGGACCCGCAGACGTGCGCTCAGGGGCTGCCGGAGAATGAGTTCGCCACCGCGTTCGACCGCGCCACCGAGGCGACGCTGCAGCGGTTTATATTGCCGGAGGTGTTGTGGAAGATGAAGAAATGGCTTCGGCTTGGATTGGAAGTTAGCTTGAGCCGGAGCCTTGGCCACGTGGACGAGCATTTGTCGAGTGTGATTGAGAAGAGGAAATTGGAGTTGCTGAATCAGCAGAAGGATGGGACCCACCATGATGACTTGCTGACTAGGTTTATGAGGAAAAAAGAGTGTTACTCGGATGAGTTTCTGCAACACGTGGCGCTGAATTTCATCCTAGCTGGACGTGACACGTCGTCGGTTGCGCTGAGCTGGTTTTTCTGGCTGGTGACTCAGAATCCGAGGGTGGAGGAGAAGATCCTACGTGAGATCTCGACCGTCCTGGTGGAGACACGTGGTGATGATTTGGAAAAATGGGTTGACGAGCCGTTGGTGTTTGAGGAGGTTGACCGCTTGGTTTACCTCAAGGCTGCCTTGTCCGAGACGCTAAGGTTGTATCCTTCCGTGCCCGAGGATTCGAAGCATGTGGTGGCCGACGATGTGTTGCCGGACGGGACATTTGTCCCGGCCGGATCGTCGGTGACATATTCGATATACTCGGCCGGGAGGATGAGGTCAACATGGGGTGAGGATTGCATGGAGTTTCGACCAGAGAGGTGGTTGTCATTGGATGGGACAAAATTTGTCCAGCATGATCCTTTCAAGTTTGTTGCTTTCAATGCTGGTCCTAGGATATGCTTGGGGAAGGATTTGGCTTATTTGCAGATGAAGTCCATTGCCTCCGCGGTGCTCCTCAACCACCGGCTTGAAGTGGTACCTGGCCACCAGGTGGAGCAGAAGATGTCACTCACGTTGTTCATGAAAAATGGGCTCAAGGTCAATGTGCACCGCAGGGATTTGAAGGGAGTTTTGGCAAGTATACAGAAAGAAAAAGAAAGAGAAGGAGAAGTTCAGGTGAAAGATTCCAGATAG 1605 0.5383 METCTAILLLTAITVYLLWFTFISRSLRGPRVWPLLGSLPGLIENCDRMHDWICDNLRACGGTYQTCICAIPFLAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWHAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKDRLCKVLKQAELKAEAVDLQDLMLRLTFDNICGLAFGRDPQTCAQGLPENEFATAFDRATEATLQRFILPEVLWKMKKWLRLGLEVSLSRSLGHVDEHLSSVIEKRKLELLNQQKDGTHHDDLLTRFMRKKECYSDEFLQHVALNFILAGRDTSSVALSWFFWLVTQNPRVEEKILREISTVLVETRGDDLEKWVDEPLVFEEVDRLVYLKAALSETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSAGRMRSTWGEDCMEFRPERWLSLDGTKFVQHDPFKFVAFNAGPRICLGKDLAYLQMKSIASAVLLNHRLEVVPGHQVEQKMSLTLFMKNGLKVNVHRRDLKGVLASIQKEKEREGEVQVKDSR* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1877 534 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1877 534 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1877 534 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1877 534 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1877 534 Pfam Cytochrome P450 28 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1877 534 PANTHER CYTOCHROME P450 86A7 4 511 - -
Lja3g1877 534 SUPERFAMILY Cytochrome P450 27 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1877 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Lja3g1877 534 Gene3D Cytochrome P450 24 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1877 534 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1877 534 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1877 534 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1877 534 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1877 534 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1877 534 PANTHER CYTOCHROME P450 4 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1877 Lja-Chr3 21507967 21510627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1877 1 523 Cytochrome P450 AT2G45970 78.817 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1877 K15398 - gmx:100779986 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1877 3 21507967 21510627 Lja3g1877 3 21507967 21510627 ECH