Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1874 ATGGAGTTGAAGGCTGAGGTGAGAGGGATGCTAGATGGCCGTGCTGCTGCGGATGAGGTAGATGGGGAGGAGGTCAAGTTGTGTGGGCTGATGGATGAGTCTGTTCTTGGGAATTTGTGTGAGGGCAATGATCAAATGGGAGTGTTGGAAGGGTTTGATGGAGGGAAAATGTCTGCTGAGCCAGAAATCGATGCATCTGATGCCGTGAACAGCAGCTTGCCTGGATTGTTGAGTGAAGGTGAGAAGTGTGATGATGGTGTTGTGGTATTGGCTTCATCTGGTGGTGATAGCGAGAAGTTTGGCTGTAAGAGGAAGAGGCAGTCTATGCTTGATTGGCTGAGATGGCTTGCTGGTGTTGCGAAGAATCCTTATGATCCGGCAGTTGGTGCGGTGCCTGAAAAGTCAAAGTGGAATTCTTACAGTAATCAGGAGTTCTGGAAGCAGGTTTTGTTGTTTCGAGAGGCTGTATTTTTCAAAAAAGTGTTCGAGTCGAGCAGCGAGCAACAGACTTGGCAGACTCAGAAGATGCATCCTTGCATGTATGATGATCCCCATGAGCCAGCCTACAATCTTAGAGAGAGGCAGACAAGTAATAATAAGCCACCATCCAGACAACTTACATCAGCTGTGCGAAGGTCTTCCAAATCATATCTAAGAACTGGAGGAGAATCTGACAGTTCCTCTGGTTCAAAGACAGGTTTTGATGGATGTCCGGTATTACCCATCCCCCTAGGGCCGAGAAATCAGGCTGAAGTACCAGAGTGGACCGGCTTGACTTCTGAAAGTAATTCTAAGTGGTTGGGGACCCAAATATGGCCCTTGCAAAAAGTTAATTCCAGACTTCTTATTGAAAGGGATCCCATAGGAAAGGGAAGACAAGATTTATGTGGCTGCTCAGTGCCAGGTTCTGTTGAGTGCGTCAGATTCCACATTGCTGAGAAAAGGGCTAAAGTTAAGCTGGAATTAGGTGTGGCTTTTCACCAATGGAATTTGGATAAGATAGGTGAAGATGTTAGGATTTTGTGGACACATGAAGAAGAGAAAAAATTCAAGGACGCTGTAGAATGGGACCCTCCATCTTCTGAGGAATATTTGGGATATTTCTGGGATCCAATTTTTAAAACATTTCCTCAGAAGAGCACTGCAGATTTAGTTAGCTACTACTTAAATGTATTTCTTTTGCAACGCAGAGGACACCAGAATAGGCATACTCCTGATGACGCTAATAGTGAAGATGATGAATCACAAGAACCTCGATTGAGGAGTGGTTTTGGACGTAAATCATGTGGCCCCATCTCATTAACCCTGAAAAAGCCACGGCCAAAGGGAAAGCGTAGGAAATGA 1344 0.4539 MELKAEVRGMLDGRAAADEVDGEEVKLCGLMDESVLGNLCEGNDQMGVLEGFDGGKMSAEPEIDASDAVNSSLPGLLSEGEKCDDGVVVLASSGGDSEKFGCKRKRQSMLDWLRWLAGVAKNPYDPAVGAVPEKSKWNSYSNQEFWKQVLLFREAVFFKKVFESSSEQQTWQTQKMHPCMYDDPHEPAYNLRERQTSNNKPPSRQLTSAVRRSSKSYLRTGGESDSSSGSKTGFDGCPVLPIPLGPRNQAEVPEWTGLTSESNSKWLGTQIWPLQKVNSRLLIERDPIGKGRQDLCGCSVPGSVECVRFHIAEKRAKVKLELGVAFHQWNLDKIGEDVRILWTHEEEKKFKDAVEWDPPSSEEYLGYFWDPIFKTFPQKSTADLVSYYLNVFLLQRRGHQNRHTPDDANSEDDESQEPRLRSGFGRKSCGPISLTLKKPRPKGKRRK* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1874 447 MobiDBLite consensus disorder prediction 400 447 - -
Lja3g1874 447 SMART ELM2_2 242 293 IPR000949 -
Lja3g1874 447 MobiDBLite consensus disorder prediction 400 421 - -
Lja3g1874 447 CDD SANT 342 392 IPR001005 -
Lja3g1874 447 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 71 441 - -
Lja3g1874 447 MobiDBLite consensus disorder prediction 193 233 - -
Lja3g1874 447 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 71 441 - -
Lja3g1874 447 MobiDBLite consensus disorder prediction 193 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1874 Lja-Chr3 21437168 21440444 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1874 - - lja:Lj0g3v0293379.1 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3074 1 37329629 37334534 Lja3g1874 3 21437168 21440444 PCT