Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1862 ATGTCTGGAGACTACGATCGGTTTCGCACCGGGGAAGAAGAGATAGAAAGCGCGAAGGAGACAACGACGGAGAAGAAGAATCTGAAGCTCAAGGACCGAAAGGTGTCATGGGCAAAGCTAAGACGTTTAGACTCCCTCAATTTGGAAGCTGGAAGAGTTTCCATGAATGCAAACAACCCTTCCAAGATGGGTTGGAGAACGACGCTGGGTCTAGCATTTCAAAGCATAGGGATCGTGTATGGTGATATTGGTACATCTCCACTTTATGTGTATGCAAGCACTTTCACTGATAAAATAGAAAACAATGATGACATTCTTGGAGTTCTTTCTCTCATCATCTATACCATCGTGCTCATACCCATGCTCAAGTATGTGTTCGTCGTGTTATGGGCTAATGATAACGGCAACGGTGGAGCTTTTGCACTGTATTCATTGATATGTAGGCATGTAAAGGTGAGTTTGATCCCAAATCAACAACCAGAAGACATGAATATTTCAAACTATGCACTGGAAACACCATCTAGCCAACTGAAACGAGCCCAGAAAGTAAAGCAGAGGCTTGAGAATAGTTATTTTACTAAGATTCTGCTTTTACTTCTAGCTATAATGGGAACTGCTATGGTCATAGGAGATGGGATTCTTACTCCAGCAATTTCAGTGCTTTCTGCAGTAAGTGGGATCAGTGATTCACTAGGTCAAAATGCTGTTGTGGGTATCACTATAGCAATCTTGATCGTCCTATTTTCTGTGCAAAGGTTTGGTACTGATAAAGTGGGAATCACATTTGCTCCGATTGTTTTGACATGGTTTTTTTTCATTGGTGGCATTGGTCTCTACAATTTATTCAAACATGACATTGGAGTCTTACGTGCTTTTAATCCAAAATATATATATGATTACTTCCAAAGAAATGGTAAGAAAGGATGGATATCACTTGGTGGAGTCTTTCTATGCATCACAGGATCTGAGGCCATGTTTGCTGACTTGGGTCACTTCAATGTACGAGCTATTCAAATTAGCTTTTCTTTCATCACATGTCCTGCACTATTGGCTGCATACAGTGGACAAGCAGCATTTCTAAGGAAATACCCTGAGAAAGTGGCCAACACTTTCTATGATAGCATACCACATTCCTTATATTGGCCAACATTTGTTGTGGCTGTTGGTGCTGCCATTATAGCCAGTCAGGCAATGATTTCAGGAGCATTTTCTATTATATCACAGGCCCTCAGTCTAGGTTGTTTCCCAAAAGTTAAGGTTGTGCATACTTCAGCCAAGCACCATGGTCAAGTGTATATTCCTGAGATCAACTACATGTTCATGATTGCATGTATTCTGATATGTGCGGCCTTCAAGACCACAGACAAGATTAGCCATGCATATGGGATTGCGGTTGTTGGTGATATGGCGATAACAACGACTCTGGTTTCACTTATCATGATTATTATATGGAAGAAGAACATATGGCTGGTAGCTCTGTTCTTTACAGTATTTGGTTTCACTGAGATGATTTATCTCTCATCTCAGCTAACCAAGTTCACAGGAGGAGGCTATCTTCCAATCATATCAGCTATCTTCTTGACAACAGTGATGGGAGTCTGGCACTATGTGCACAAACAGAGGTACATGTTTGAGCTAGAAAACAAGGTTTCTAGTGATTATTTGAGGGAACTTGCCAACAACACAGACGTGGGACGAGTGCCTGGAATTGGACTTCTGTACTCTGAGCTTGTGCAAGGCATTCCTCCTATATTCACACACTTGATATCTAGTGTGCCATCAATCCATTCAGTGGTTGTGTTTGTTTCCATCAAGACAATTCCCATTAGCAGAGTAGCCTTGGAAGAGAGGTTCCTGTTTCGACAGGTGGAGCTGAGGGAGTATCGAATTTTCCGTTGTGTTGTGAGGTGTGGTTACAATGATGTGCTTGAGGAGACTGCAGAGTTTGAATCACAGTTGATACAAAACCTCAAGATGTTTGTTCAAGAAGAAAGTTACATGCTTGAGGATCATGAGGGAACAACAACTGAATTACAAGCACCTATAACCAATGAGAGTCACATAGCAATGGAAAACACCCCACAAGGTTCCAATTTGTCAGCTCAAGAAGGGAAATCTAGTTCTTCCCTCAGAATAATCCCAACTCAAGGTGTGTCTGCTAGAGTCTTATCAGGTTCTATTCAATCAATGGGTGTAAGTATGAACAAGTCATCCGCTTTCTCTGCCCCACCTATCCAGGGAGCTGAAGAAGAAATAAAATTTATAGAGAAAGCAATGGAGAAGGGTGTCGTTTATATGCTAGGGGAAGCAGAGGTAGTGGCTCATCCAAAATCCTCCATCTTGAATAAGATAGTTGTCAACTATGCTTATAGCTTCTTGCGGAAGAACTTCAGACAAGGGGAGAATTTATTGGCAATTCCACGCAACAGACTTCTCAAGGTTGGAATGACATATGAAATATGA 2463 0.4153 MSGDYDRFRTGEEEIESAKETTTEKKNLKLKDRKVSWAKLRRLDSLNLEAGRVSMNANNPSKMGWRTTLGLAFQSIGIVYGDIGTSPLYVYASTFTDKIENNDDILGVLSLIIYTIVLIPMLKYVFVVLWANDNGNGGAFALYSLICRHVKVSLIPNQQPEDMNISNYALETPSSQLKRAQKVKQRLENSYFTKILLLLLAIMGTAMVIGDGILTPAISVLSAVSGISDSLGQNAVVGITIAILIVLFSVQRFGTDKVGITFAPIVLTWFFFIGGIGLYNLFKHDIGVLRAFNPKYIYDYFQRNGKKGWISLGGVFLCITGSEAMFADLGHFNVRAIQISFSFITCPALLAAYSGQAAFLRKYPEKVANTFYDSIPHSLYWPTFVVAVGAAIIASQAMISGAFSIISQALSLGCFPKVKVVHTSAKHHGQVYIPEINYMFMIACILICAAFKTTDKISHAYGIAVVGDMAITTTLVSLIMIIIWKKNIWLVALFFTVFGFTEMIYLSSQLTKFTGGGYLPIISAIFLTTVMGVWHYVHKQRYMFELENKVSSDYLRELANNTDVGRVPGIGLLYSELVQGIPPIFTHLISSVPSIHSVVVFVSIKTIPISRVALEERFLFRQVELREYRIFRCVVRCGYNDVLEETAEFESQLIQNLKMFVQEESYMLEDHEGTTTELQAPITNESHIAMENTPQGSNLSAQEGKSSSSLRIIPTQGVSARVLSGSIQSMGVSMNKSSAFSAPPIQGAEEEIKFIEKAMEKGVVYMLGEAEVVAHPKSSILNKIVVNYAYSFLRKNFRQGENLLAIPRNRLLKVGMTYEI* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1862 820 MobiDBLite consensus disorder prediction 1 24 - -
Lja3g1862 820 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 29 819 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja3g1862 820 Pfam K+ potassium transporter 72 641 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja3g1862 820 TIGRFAM kup: potassium uptake protein 71 820 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja3g1862 820 PANTHER POTASSIUM TRANSPORTER 5 29 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1862 Lja-Chr3 21261515 21267687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1862 11 820 Inorganic Solute Cotransporters AT4G13420 57.407 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1862 K03549 - gmx:100814313 1240.71