Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1850 ATGGCTGATGAAATAGAATATAAAAGGTTAGATGAGTTAAGTTCCTATGGAAAAATCGGGGATGATCGACTAGTATGTCGATACATTGAGAAACACGCGTCCAAGGGCATATTTCGTGGGGATAATCCCCTCCATCATGACACATCCATGTTAATAATAGAGATTATTCTTATATTCATTGTTGGTAGAATGATCCAACTCTTGTTGAAATCTTGTCATCAAACACAATTCATTTCACATGTTGTGGCTGGTATCATGTTGGGTCCCTTATTTCTTGGTCGATACCATTCAAGTTATGAGTTATTGTTTCCAGCAGCAAGCAAATTGACGCTTTCAACATTTGCAGAATTTGGCATGATAATTTACTTCTTCAAGATAGGGGTGCAGATTAATCCCAAACATTTATTTAAGTTTGAAAAGAAAACAACAATAATAGGTTTAGTAGGCCACATATCTTCTATATTGTCGGGAATTGTAGTTTTAAGTATTGTTCAAAGAGGCTCATATCTCAAGTCTGAAGTGACTGGTGTTATACGTTTGATAATTCTTGATGCTTTAACTGCATTTTCTGCTATAAGTAGCCTCCTCAATGAGATAAACATTCTCAATTCAGAGATTGGACGAATGGCTTTATCTGCTTCCATGGTTAGTGATGCGAGCTCGTGGATTTTATTTTTTTCTGTAGCCAATAGTATTAAAAACTTCAACCAAACATCATTTATACCTATTGTGGCAATGGTTGTGACAGTTTGTTATTTCACAAGTTTATTCTTCCTGCTAAGGCCACTAGTTATATGGATCTCCAACCGCAATCCACGAGGAAAGCCTATGACAGAAGGTCATTTCTTGTCAATCATGTTTATACTTTTATTTATTGGATTCTCTGCACAAAGCGTTGGGCAACCTTCTTTCATTGTTGCCTTTTGGTTTGGATTAATCTTACCGGATGGTCCCCCTTTAGGTTCTATTCTTGTAGAAAGGATTGATACCATTGGTTCTACTTTGATCGTTCCAGCTTACTGTACTATAAGCGGGATGAGGACAATTGTTCCCCCATTATCATCACAGGCTGCATGCATAGTGGTTGTTTTACTTGCAGGGCAAATAGGAAAGTTTGCAGGCACAATTTTACCCTCACTTTACTTTGAAATTGAATTATGGGATTCTATTACGTTGTCTCTAATCATGTGTTGCAAAGGCCTTATAGATCTCGCACTCTACACCTTATTATTTGATAATAAGGTATATTTTAAGGCTACACCATTTTCAGTCTTTGTTATACATCTCATGGAACTCTCAGGCAGAGCAGCCCCCATCCTTACAAAAAATGAGAACACTGAGAAGTCATATCCGAATGGAGATTCATCCTATCAACAGATAAACAACGTTTTTGATCAATTTCAACAACAGAACAAAGGAAGTGTCTCGTTGGAGTGCTTCACAACTATTGCACCATTTGCTAGCATGCACGATGATATATGCTACTTTCAATGGTCCATCAATGGAAATGTTGAGGTTTCTAATCCTTCAATTAGGACACTAAACCAGAAAGTTCTGAGTAAATCTCCTTGCTCAGTCGGAGTCTTAATTGATAGAAGCCAGATGAGCGGCAAACCGTTAGTTATTTATGAGAATTCATTATGTGAAATTGCCATGATCTTCTTTGGTGGTGCTGACGACCAAGATGCATTGGCCTTTAGTTTTAAAATGGCTCAACATCCAAATATTAGACTTACAGTGTTTTGGGTAAGGGTTAATATGCATCACATACAAAGGAATATGAAAAATCCTTATATTGACGTGATGGAGCATATAAAGTATAATCCTAACCTTAAAGGGAAGGTAAACTTTAAGGAGGAGATTGTGGAAGATGGGATAGGAACAACACATGTTATCCAAACAATGGAAGGCCATTTTAATTTGGTCATAGTGGGTAGACACCATATAGCAGACTCAAGAAGTACATTAGGCTTGACAGAATGGTGTGAACTCCCTGAGCTTGGGCCTATTGGGAACCTCCTAGCATCAGATTTTACATTTTCAGTTTTGGTGGTGCAACAACAACCCTTTAACTTAGATGCTCGATGA 2088 0.376 MADEIEYKRLDELSSYGKIGDDRLVCRYIEKHASKGIFRGDNPLHHDTSMLIIEIILIFIVGRMIQLLLKSCHQTQFISHVVAGIMLGPLFLGRYHSSYELLFPAASKLTLSTFAEFGMIIYFFKIGVQINPKHLFKFEKKTTIIGLVGHISSILSGIVVLSIVQRGSYLKSEVTGVIRLIILDALTAFSAISSLLNEINILNSEIGRMALSASMVSDASSWILFFSVANSIKNFNQTSFIPIVAMVVTVCYFTSLFFLLRPLVIWISNRNPRGKPMTEGHFLSIMFILLFIGFSAQSVGQPSFIVAFWFGLILPDGPPLGSILVERIDTIGSTLIVPAYCTISGMRTIVPPLSSQAACIVVVLLAGQIGKFAGTILPSLYFEIELWDSITLSLIMCCKGLIDLALYTLLFDNKVYFKATPFSVFVIHLMELSGRAAPILTKNENTEKSYPNGDSSYQQINNVFDQFQQQNKGSVSLECFTTIAPFASMHDDICYFQWSINGNVEVSNPSIRTLNQKVLSKSPCSVGVLIDRSQMSGKPLVIYENSLCEIAMIFFGGADDQDALAFSFKMAQHPNIRLTVFWVRVNMHHIQRNMKNPYIDVMEHIKYNPNLKGKVNFKEEIVEDGIGTTHVIQTMEGHFNLVIVGRHHIADSRSTLGLTEWCELPELGPIGNLLASDFTFSVLVVQQQPFNLDAR* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1850 695 Gene3D - 48 448 IPR038770 -
Lja3g1850 695 PANTHER CATION/H(+) ANTIPORTER 14 37 420 - -
Lja3g1850 695 PANTHER CATION/H + ANTIPORTER 37 420 - -
Lja3g1850 695 PANTHER CATION/H(+) ANTIPORTER 14 419 689 - -
Lja3g1850 695 PANTHER CATION/H + ANTIPORTER 419 689 - -
Lja3g1850 695 Pfam Sodium/hydrogen exchanger family 55 427 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1850 Lja-Chr3 21022552 21025573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1850 10 687 Antiporter Super Family AT5G01690 25.732 9.25e-68 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1850 - - aprc:113851213 567.385