Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1849 ATGGAACATGAAAGGCTAGATGAGCTAAGTTCCTATGGAGAAATTGGGGATGAGCGATTAGTATGCCGGTACATTGAGAAACACTCAACCAAGGGCATATTTCTTGGGGATAATCCCCTCCATCATGCCACATCCATGATAATAATTCAGATTATTCTTATATTCATTGTTGGTAGAATAACCCATTTCTTGTTGAAACCTTGCCATCAAACACAACTCACTTCACAGATTGTGGCTGGTATCATAATGGGTCCCTTATTGTTTGGTCAATACCGTTCAGGTTATGAGTTGTTGTTTCCAGCAGCAAGCAAATTGACGCTTCAAACATTTGCAGAATTTGGCATGATAATTTATTGCTTCAAGATAGGGGTGCAAATCAATCCCAAACATATCTTTAAGTTTGAAAAGAAGGCAACGGTTATAGGTTTAGTAGGCCACATATCTTCTATATTGTTTGGAATCGTAGTTTTCATTATTGTTCAGAGAAGCTCCTCTCTCAAGTCTGAAGTGAGTGGTGTTCTACGTTTGATAGTTCTTGATGCTTTGACTGCATTTTCTTCTATAAGTAGACTCCTCAGCGAGATAAACATTCTCAATTCAGAGATTGGACGGGTGGCTTTATCTGCTTCCATGGTTAGTGATGCAAGCTCGTGGATTTTATTTTTTTTAGTACGCAACAGTGTTAAAAACGTCTACCAAGCATCATTTATACCTGCTGTGGCGATGGTTGTGACAGTTTGTTATTTCATAAATTTATTCTTCCTGCTAAGGCCGTTGGTTATATGGATCTCCAACCGCAATCCACGAGGAAAGCCTATGACAGAAGGCAATTTCTTGTTAATTATGTTTATACTTCTATTTATTGGATTCTCTGCACAAAGCGTTGGACAACCTTCTTTCATTGTTGCTTTTTGGTTTGGATTAATCTTACCGGATGGTCCCCCTTTAGGTTCTGTTTTGGTAGAAAGGATTGATACCATTGGTTCTACTTTGATTATTCCAGCTTATTGTACTATAAGTGGGATGAGGACAATTGTTCCCCCATTATCATCACAAGATGCATGCATAGTGGCTGTTTTACTTGCGGGACAAATAGGAAAGTTTGCCGGCACAATTTTACCCTCACTTCACTTTGAAATTGAATTATGGGATTCTATTGCGCTATCTCTAATCATGTGTTGTAAAGGTCTTATAGATCTCGCACTCTACACCTTATTATTTGATAGTAAGGACATTGGGGTACTTTCTTTCACCCTTGGAATATATACCATGGTGGGTGTAACTGGATTTGCAACCTTAGTTATTTATTACATATATGATCCTTCAAAGAAGTACAAAAATTACATCAGAAAATCAATCAAGGGCTCCCAGCAGGACCTTGAATTTAAAGTACTTGTTTGCGTCCACAATGAAGAAAATGTACATCCATTGATCAACCTTCTCCAAGTCTCTGGCCCTTCAAAGGCTACACCGCTTTCAGTCTTTGTTCTACATCTCATGGAACTTTCAGGCAGGGCAGCCCCCATCCTTACAAAAAATGAGAACACTGACAAGTCACATCCGAATGGAGATTCATCCTCTCAACAGATAAACAACGTTTTTGATCAATTTCAACAGCACAACAAAGGAAGTGTCTCGTTGGAGTGCTTCACAACTATTGCACCATTTTCTAGCATGCACAATGATGTATGCTACATTGCGATGAACACAAAATGTCACGTTGTGATTATGCCATTTCATAAGCAATGGTCCATCAATGGAAATGTTGAGATTTCTAATGCTTCAATCAGGACACTAAATCAAAAAGTTCTGAGTAAATCTCCTTGCTCAGTTGGAGTTTTAATTGATAGAAGTCAAACGAGCAGCAAACCGTTAGTTTTTTATGAGAATTCATTATGTGAAATTGCCATGATCTTCTTAGGTGGTGCTGACGACCAAGATGCATTGGCCTTTAGTTTTAAAATGGCTCAACATCCAAATATTAGACTCACAGTGTTTTGGGTAAGGGTTAATATGCATCACATACAAAGGAATATGAAAAACCCTTATATTGACGTGATGGAGCATATAAAGTATAATCCTAACCTTAAAGGGAAGGTAAACTTTAAGGAGGAGATTGTGGAAGATGGGATAGGAACAACACATGTTATCCGAACAATGGAGGGACATTTTAATTTGGTTATAGTGGGTAGACACCATATAGCAGACTCAAGATGTACATTAGGTTTGACAGAATGGTGTGAACTCCCAGAACTTGGGCTTATTGGGAATCTCCTAACCTCAGATTTTACATTTTCAGTTTTGGTGGTGCAACAACAACCCTTCAACTTAGATATCTAA 2340 0.3833 MEHERLDELSSYGEIGDERLVCRYIEKHSTKGIFLGDNPLHHATSMIIIQIILIFIVGRITHFLLKPCHQTQLTSQIVAGIIMGPLLFGQYRSGYELLFPAASKLTLQTFAEFGMIIYCFKIGVQINPKHIFKFEKKATVIGLVGHISSILFGIVVFIIVQRSSSLKSEVSGVLRLIVLDALTAFSSISRLLSEINILNSEIGRVALSASMVSDASSWILFFLVRNSVKNVYQASFIPAVAMVVTVCYFINLFFLLRPLVIWISNRNPRGKPMTEGNFLLIMFILLFIGFSAQSVGQPSFIVAFWFGLILPDGPPLGSVLVERIDTIGSTLIIPAYCTISGMRTIVPPLSSQDACIVAVLLAGQIGKFAGTILPSLHFEIELWDSIALSLIMCCKGLIDLALYTLLFDSKDIGVLSFTLGIYTMVGVTGFATLVIYYIYDPSKKYKNYIRKSIKGSQQDLEFKVLVCVHNEENVHPLINLLQVSGPSKATPLSVFVLHLMELSGRAAPILTKNENTDKSHPNGDSSSQQINNVFDQFQQHNKGSVSLECFTTIAPFSSMHNDVCYIAMNTKCHVVIMPFHKQWSINGNVEISNASIRTLNQKVLSKSPCSVGVLIDRSQTSSKPLVFYENSLCEIAMIFLGGADDQDALAFSFKMAQHPNIRLTVFWVRVNMHHIQRNMKNPYIDVMEHIKYNPNLKGKVNFKEEIVEDGIGTTHVIRTMEGHFNLVIVGRHHIADSRCTLGLTEWCELPELGLIGNLLTSDFTFSVLVVQQQPFNLDI* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1849 779 Gene3D - 44 447 IPR038770 -
Lja3g1849 779 PANTHER CATION/H + ANTIPORTER 33 774 - -
Lja3g1849 779 PANTHER CATION/H(+) ANTIPORTER 14 33 774 - -
Lja3g1849 779 Pfam Sodium/hydrogen exchanger family 49 434 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1849 Lja-Chr3 20992219 20995223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1849 18 773 Antiporter Super Family AT1G06970 36.223 2.77e-171 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1849 - - gmx:100804488 1017.68