Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1835 ATGGCGGAGGAATCGGCGGAGAGCACGGTCACGGCGGCGGCGACCGGTGAATCGCTTCTTGACAAGATCAGCGACAAGCTTCACGGTCACGATTCTTCCTCCGATTCCGATTCCGAGAAACCCTCCCTTTCTTCCGTTAAGCAGAAGATTTTCCGCCTTTTCGGTAGGGAGAAGCCCCTCCATTCCGTCCTCGGCGGCGGAAAGCCTGCTGATGTTCTGTTGTGGAAGAACAAGAAGGTATCTGCTGGTGCACTTGGAGTAGCTACTGCTGTTTGGCTCTTTTTTGAGCTGCTTGAATACCATCTTCTTACTCTAGTGTGTCACATTTTGATTCTTTCGATTACGCTTTTGTTTTTGTGGTCCAATGCTCATACCTTACTTCACAAGGCTCCGCCTCGCATTCCTGTGTTTCATCTTCCTGAAGAGCCGTTTCTGGAAATTGCGTCTGCATTGAGAATTGAGATCAATCACGGGTTTGCTGCATTGCGTGATATTGGTACTGGAAAAGATGTGAAGAAATTCCTCATTGCTATTGTTGGCTTGTGGATTCTATCCATTGTGGGGAGTTGGTGCAATTTCTTGACTCTGTTCTACATAAATTTTGTTCTGTTGCTCACAATTCCTTTCTTGTATGACAAGTATGAGGATAAGATAGACCCTCTGGCTGAGAAGGCAGCCCATGAGATTAAGAAGCAGTATGTGGTGTTTGATGCAAAGGTCTTGAGTAAGGTCTTGAGTAAGATTCCAAAAGGTCTATTGAAGGGGAAGTTAGCTTAG 777 0.462 MAEESAESTVTAAATGESLLDKISDKLHGHDSSSDSDSEKPSLSSVKQKIFRLFGREKPLHSVLGGGKPADVLLWKNKKVSAGALGVATAVWLFFELLEYHLLTLVCHILILSITLLFLWSNAHTLLHKAPPRIPVFHLPEEPFLEIASALRIEINHGFAALRDIGTGKDVKKFLIAIVGLWILSIVGSWCNFLTLFYINFVLLLTIPFLYDKYEDKIDPLAEKAAHEIKKQYVVFDAKVLSKVLSKIPKGLLKGKLA* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1835 258 PANTHER RETICULON 7 257 IPR045064 GO:0009617
Lja3g1835 258 PANTHER RETICULON-LIKE PROTEIN 7 257 - -
Lja3g1835 258 ProSiteProfiles Reticulon domain profile. 69 258 IPR003388 -
Lja3g1835 258 Pfam Reticulon 70 225 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1835 Lja-Chr3 20856326 20858610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1835 - - mtr:MTR_8g028450 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1835 3 20856326 20858610 Lja5g0679 5 6104078 6106719 ECH
Lja3g1835 3 20856326 20858610 Lja3g1835 3 20856326 20858610 ECH
Lja1g3006 1 36447515 36453813 Lja3g1835 3 20856326 20858610 PCT