Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1799 ATGTCCATGTCCACCTTCACCTTGTTTTGCATCTTTCTCATCTTTGCACCTCTTCAGCTACTCTCATCAGAACCCATCATCAACAGGAGGATCCTCCACCAACCCTTCACACAAGGCTCCCTTCCACCCTCTCAACCCCCAAACCCACCACCACCATCACCATCTCCCTCACCTCCAAACCCAAAATACCCATTTTCCTCCACCCCCACAACCACCACCACCCAAAATGCCTCCACACCTTTCTTCCCCACATACCCATCTCCACCACCACCTCCTTCTCCCTCCTCCTTCGCCTCCTTCCCCGCCAACATCTCCTCCCTCATCCTCCCTCAAACCTCCAAACCCAAATCCTCCCACAAGCTCCTCGGCGTCGCCATTGCCGCCGTCGCCTGCGCCATCGCCGTCGTCTCTGTCTCCGCCTTCGTCTACTGCCGACGCCGCCGCAAAAACTACTCCGCCGACGAGAAGACTCTCAGATCCGACAGCAGCATCCGCCTCTTCCCCCGTGAAGCTCCCGGAACCGCCGGCAGCCGCAAGACGAGAAACGTCTCTTCCACCAGCTCAGATTTTCTCTACCTCGGCACCATTGTTAACTCCCGCGGCGATGAACTCCCAGATCCTCGCTCCGGCGGTGGCGGAGCTAGCTTGAATCCCAGGAAAATGGACTCGCCGGACCTTCAGCCTCTCCCGCCGCTAGCGCGGCAAGCTTCCAGACTCCGCGATGAAACGGCGTCGGCGGACGATGAAGAAGAGTTCTACTCGCCGAAGGGGTCTCTGGGTGGTCGTGAAAGCTCCAACGGAGCTGGATCGGGTTCTCGGAGAATGTTCAACGCCATTGCCGCTGAGAACTTCGTCGGTCGCAGCAGCACTGAGTCGTCTTCTTCTACCTACTCCTCTTCCAACTCTGCTTCACCCGATCGCTCTCACTCCATTAGCCTCTCTCCGCCGGTGAGCATAAGCCCCAGAAGATCACTACCCAAGTCGCCGGAAACCGAACTGACCCACCATTCTTCTCCTCGTATTACTCCGCTGCCGACGCCGCCACTCGCCAGAAGCGACGGTAGGAGCTCGCTGTCATCATCCACGCTCTCATCGCCGGAAGCTTTGTCAAACCCGCACGTGCAGTCTTCAATGTCTTCAACGCCGGAGCGAGCCGTCACCGGGAAGTGTCAGTCTCCGTCGCTGTCACCGCTCTGCCGGTCGCCGGAGAGTAACCCAGATGGGTCTAGTGTTGTCCTCGGAAAGTCTCAGTCCTATCACTCATCGCCGGAGAAAAACAAAGACGCTTCACCCAGGTTGTCCAATGCTTCTTCCGGTGGCAAGTCTGTCTCTTCGTCTTCGGCGTTTTCTCTACCGTCGCCGGAGAAAATGATGGCGATGCATCACCGTCATGGGTTGGATCAGTCTCCGACTATATCAGATGTATCAGATCGGTATAGGCATTCCCCACTTTCCTCACTTCCGTTGTCACCGACACTGCTTTCATCGCCGGAGAGAGAGGTGAACCATCAATCAGCACCTTCTCGGAAGCATTGGGAGATTCCAGACCTCTTAACACCACCCATTGTTGAATCACCAGCTGTTCCAACGGTTTTGATTCAACCAGGGGTGTCTCAGAGGAAACAGTGGGAAATACCAGTTCTTTCAACACCCAATATTGCTCCTTCTGTTATAGTTTCAGCCCCTCCTCCTGCTCCGCCACCACCGCCACCGCCACCACTGTCTAGGCAGCGTAAACAGTGGGAAGTACCTGTTCCTTCAACCCCTGTGGGACAAACCATTTCGAGGCCGCCGCAACTGTCGCCTCCTTCTAGGCCTTTTGTGTTGCAAACCCCAACTACAAAGCTTTCTCCGGTTGAGTTGCCACCGAGTTCTCAGAATCTGGGCGTGGTTGAGGAGTGTTCAGAGGAGGCATCAAAACCCAAGTTGAAGCCCTTGCATTGGGACAAAGTGAGGGCCAGCTCTGATCGTGAAATGGTTTGGGATCAGTTGAGGTCCAGCTCTTTTAAGTTGAATGAGGAAATGATCGAAACGTTGTTTATAGTGAACACGCCAAACTCAAAACCCAAGGATTCTACCCCACGTTCATCTCTTGCCCCGCAAAATCTGGAGGATAGGGTATTGGATCCTAAGAAGTCTCAGAATATTGCTATCTTGCTCAGAGCACTTAATGTGACTATAGATGAAGTGTGTGATGCACTGTTGGAAGGTGTTACTGATACACTTGGAACTGAACTACTTGAAAACTTGTTAAAAATGGCACCAAGCAAGGAAGAAGAACGTAAATTGAAGGAACATAAAGATGACTCTCCAACCAAGCTTGGTCCTGCTGAGAAATTTCTGAAGGCGGTGCTTGGTGTACCTTTCGCATTTAAAAGGGTTGAAGCAATGCTTTACATAGCCAATTTTGAGTCAGAAGTGGAATATCTTAGGAAATCCTTTCAAACTCTAGAGGTTGCCTGTGAAGAGTTGCGAAACAGTAGAATGTTTTTGAAGCTTCTAGAAGCTGTGCTTAAAACCGGGAACCGCATGAATGTGGGGACAAACCGTGGTGATGCTCACGCATTCAAGCTCGATACACTTCTCAAGCTGGTTGATGTCAAAGGCGCGGATGGGAAAACCACTCTACTGCACTTTGTTGTGCAAGAAATCATTAGAACTGAAGGCGCTCGTCCCTCCAGCACCAATACTAATCAAACCCCAACCACGAATGATGATGTCAAGTGTAGGAGGCTTGGCTTGCAGGTTGTGTCAAGTCTAAGTTCCGATCTAGCAAATGTTAAGAAGTCGGCTGCTATGGATTCTGAAGTTCTCAGCAGTGAAGTCTCTAAACTTTCCCAAGGAATTGCGCGAATCGCGGAGGTCGTGAAGCTGAATGAAACGGCGGGGTCAGGCGAAAGCAGGCAGAAATTTTCAGAATCAATGAACAAGTTCATGAGAATGGCTGAGGAAGAGATTCTGAGAATTCAAGCCCAGGAAAGCGTTGCATTGTCCCTTGTGAAGGAGATTACAGAGTATTTCCATGGGAACTTGTCCAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTAGTGAGAGACTTCTTAACAGTTCTCGATCGGGTTTGCAAAGAAGTCGGCATGATAAACGAGCGAACCATGGTGAGTTCTGCACACAGATTCCCTGTTCCAGTGAACCCTATGCTTCCACAACCACTTCCTGGACTAGTCCAATTAAAGCGACCTCACAGCTCCTCAGATGACGATAGTTCATCTCCTTAG 3261 0.5143 MSMSTFTLFCIFLIFAPLQLLSSEPIINRRILHQPFTQGSLPPSQPPNPPPPSPSPSPPNPKYPFSSTPTTTTTQNASTPFFPTYPSPPPPPSPSSFASFPANISSLILPQTSKPKSSHKLLGVAIAAVACAIAVVSVSAFVYCRRRRKNYSADEKTLRSDSSIRLFPREAPGTAGSRKTRNVSSTSSDFLYLGTIVNSRGDELPDPRSGGGGASLNPRKMDSPDLQPLPPLARQASRLRDETASADDEEEFYSPKGSLGGRESSNGAGSGSRRMFNAIAAENFVGRSSTESSSSTYSSSNSASPDRSHSISLSPPVSISPRRSLPKSPETELTHHSSPRITPLPTPPLARSDGRSSLSSSTLSSPEALSNPHVQSSMSSTPERAVTGKCQSPSLSPLCRSPESNPDGSSVVLGKSQSYHSSPEKNKDASPRLSNASSGGKSVSSSSAFSLPSPEKMMAMHHRHGLDQSPTISDVSDRYRHSPLSSLPLSPTLLSSPEREVNHQSAPSRKHWEIPDLLTPPIVESPAVPTVLIQPGVSQRKQWEIPVLSTPNIAPSVIVSAPPPAPPPPPPPPLSRQRKQWEVPVPSTPVGQTISRPPQLSPPSRPFVLQTPTTKLSPVELPPSSQNLGVVEECSEEASKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFIVNTPNSKPKDSTPRSSLAPQNLEDRVLDPKKSQNIAILLRALNVTIDEVCDALLEGVTDTLGTELLENLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKAVLGVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARPSSTNTNQTPTTNDDVKCRRLGLQVVSSLSSDLANVKKSAAMDSEVLSSEVSKLSQGIARIAEVVKLNETAGSGESRQKFSESMNKFMRMAEEEILRIQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMVSSAHRFPVPVNPMLPQPLPGLVQLKRPHSSSDDDSSSP* 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1799 1086 MobiDBLite consensus disorder prediction 66 81 - -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 283 327 - -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 682 700 - -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 1065 1086 - -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 36 96 - -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 682 704 - -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 469 502 - -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 558 580 - -
Lja3g1799 1086 PANTHER FORMIN-RELATED 8 1086 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lja3g1799 1086 MobiDBLite consensus disorder prediction 352 420 - -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 558 577 - -
Lja3g1799 1086 SUPERFAMILY Formin homology 2 domain (FH2 domain) 562 1044 - -
Lja3g1799 1086 PANTHER FORMIN-LIKE PROTEIN 1 8 1086 - -
Lja3g1799 1086 SMART it6_source 633 1047 IPR015425 -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 240 256 - -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 428 452 - -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 201 513 - -
Lja3g1799 1086 Pfam Formin Homology 2 Domain 637 1032 IPR015425 -
Lja3g1799 1086 ProSiteProfiles Formin homology-2 (FH2) domain profile. 633 1058 IPR015425 -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 82 96 - -
Lja3g1799 1086 MobiDBLite consensus disorder prediction 40 65 - -
Lja3g1799 1086 Gene3D Formin, FH2 domain 628 1041 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1799 Lja-Chr3 20314499 20318942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1799 581 1070 FH2 protein (formin) Gene Family AT3G25500 74.747 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1799 - - gmx:100802678 1338.94