Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1797 ATGGAACAATTCAGACAGATTGGGGAGGCACTTGGGAGTTTGAAGGCTGTGATGGTGTTCCGCGAAAACATTCAAATCAATCAGAGGCAATGTTGTCTATTGCTTGATGTCTTCACCTTTGCATATGAGTCCATTGCAGATGAGATCACACAGAACCTGAAATTTGAAGAGAAGAATGGCAAGTGGAAGGTTCTTGAACAGCCCTTGAGAGAGATCCACAAGATTTTCAGAGAAGGAGAAGTTTACATCAAGAATTGCTTGGAAACCAAGAACTGGTGGGCTAAAGCCATCACCTTGTGCCACAACACAGACTGTGTTGAGTTTCACATACACAACTTGCTTTGTTGCATGCCCGTTGTGATTGAAGCCGTTGAAACTGCAGGAGAAACCTCGGGGTGGGATCTGGATGAGATGCAAAGGAAGAGGCTCATCAACTCCAACAAGTACAGGAAAGAATATAGAGACATGAAGCTTTTTCAATGGAAATTTGGGAAGCAGTACCTCATTACTCAGGAGTTTTGCAACCGTTATGACACGGTTTGGAAGGAAGATAGGTGGTTTCTTTTAAACAAAATTCATGAGAAGAAAGAGTCAGGCACAACAAACCATGAGAAGAAATTAATAGATCTGCTTTTGAGGAATCTAGAAAAATCAGATTCACTTGAAGAAGGGAAGCTCCTCCCAAGCTCAATATTGGTTGGGTCCAAGGACTATCAGGTGAGGAGAAGAATGGGGAATGGAAGTCACTACAAGGAGATTCATTGGTTAGGTGAAAGTTTTGTATTAAGACATTTCTCTGGGGAAGTCAATGCTTTGGAGCCTGAGATCAATGAACTTTTATCTCTTTCCCATCCAAATATAATGGATTGTCTTTGTGGGTTCACTGATGGGGAGAAGAAAGAATGCTTTTTGTTGATGGAATTGATGAGCAAAACCTTAAGCAACCACATCAATGAGGTCCATGGCCCAAGGAAGAGAACACAGTTCTTGCTTCATGTGGCAGTTGATCTCATGCTTCAGATTGCTAGAGGAATGGAGTATCTGCATTCAAAGAAATTATATCATGGTGAACTGCAACCTTCAAACATTCTTGTTAAGCCAAGAGGTACCTCCCCAGAAGGTTACTTGCATGCCAAGGTATCAGGGTTTGGCCTGTCTTCTGTCAAGGACTTAAACCAGAAAGGAAACACAAATCAGAATGGAACTTTCCCATTCATCTGGTACTCTCCTGAAGTACTTGAAGAGCAAGAACAATCAGGGGGTTCATGTGCATCAAACTCCAAGCACACAGAGAAATCTGATGTGTACAGTTTTGGAATGCTTTGCTTTGAGCTTCTAACAGGTAAAGTCCCTTTTGAAGATAGCCATCTTCAAGGGGAAAAAATGAGCAGAAACATAAGGGCAGGTGAGAGGCCTCTTTTCCCTCTCCATTCACCAAAATATGTTGTCAACTTGACAAAGAGATGTTGGCACATTGATCCCAATCAACGCCCGAGCTTCTCCTCCATATGTAGAGTTCTTCGTTATATAAAGAGATTTCTTGCATTGAATCCTGGTTACAGCAGCCAGCCAGATCCACCAGTGCCACCACTAGATTACTGTGATATGGAGTCTGCACTTTTGAGGAAGTTTCCTTCTTGGGGAAGCTCTGAACCATCATCACCAATATCAAATATCCCATTTCAAATGTTTGCTTACCGCGTTATCGAGATCGAAAAATTAAGAACATCCTCCAAGGATAACTCTGAATCTGGAAGTGATGCTTCAGCCTGTGGTGAAGAACTCGTTACTTCTGGGGATGAGCCATTTCTACCTACAACTGATAAGAAAACTTTACTTGGATCTGAAACTATGAGCAGGAGGCTCACACTGTCCAGGAAATCTCTAGATTCCAGGACCAAACTGCCAGGTACCCCAAGAGGGAGAATAGCTAGACCTCCACAAATGTCCCCTCGTACAAGAGGTCTAAGGGCTAATTTGGAGAACCACCAAATATCAAGTCCAAGAACAATAAGAAGAGCATCTTCTGGTCATGTCTCAGACTCTGAGCTTTCTTAG 2058 0.4257 MEQFRQIGEALGSLKAVMVFRENIQINQRQCCLLLDVFTFAYESIADEITQNLKFEEKNGKWKVLEQPLREIHKIFREGEVYIKNCLETKNWWAKAITLCHNTDCVEFHIHNLLCCMPVVIEAVETAGETSGWDLDEMQRKRLINSNKYRKEYRDMKLFQWKFGKQYLITQEFCNRYDTVWKEDRWFLLNKIHEKKESGTTNHEKKLIDLLLRNLEKSDSLEEGKLLPSSILVGSKDYQVRRRMGNGSHYKEIHWLGESFVLRHFSGEVNALEPEINELLSLSHPNIMDCLCGFTDGEKKECFLLMELMSKTLSNHINEVHGPRKRTQFLLHVAVDLMLQIARGMEYLHSKKLYHGELQPSNILVKPRGTSPEGYLHAKVSGFGLSSVKDLNQKGNTNQNGTFPFIWYSPEVLEEQEQSGGSCASNSKHTEKSDVYSFGMLCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLHSPKYVVNLTKRCWHIDPNQRPSFSSICRVLRYIKRFLALNPGYSSQPDPPVPPLDYCDMESALLRKFPSWGSSEPSSPISNIPFQMFAYRVIEIEKLRTSSKDNSESGSDASACGEELVTSGDEPFLPTTDKKTLLGSETMSRRLTLSRKSLDSRTKLPGTPRGRIARPPQMSPRTRGLRANLENHQISSPRTIRRASSGHVSDSELS* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1797 685 MobiDBLite consensus disorder prediction 576 685 - -
Lja3g1797 685 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE 1 641 - -
Lja3g1797 685 SUPERFAMILY Protein kinase-like (PK-like) 233 535 IPR011009 -
Lja3g1797 685 ProSiteProfiles Protein kinase domain profile. 238 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1797 685 PANTHER SERINE-THREONINE PROTEIN KINASE 1 641 - -
Lja3g1797 685 MobiDBLite consensus disorder prediction 655 685 - -
Lja3g1797 685 Pfam Protein of unknown function (DUF1221) 21 235 IPR010632 -
Lja3g1797 685 Pfam Protein tyrosine and serine/threonine kinase 269 506 IPR001245 GO:0004672|GO:0006468
Lja3g1797 685 Gene3D Transferase(Phosphotransferase) domain 1 232 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1797 Lja-Chr3 20293855 20297274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1797 275 507 MAP Kinase Kinase Kinase AT5G58950 28.814 8.76e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Lja3g1797 PK_Tyr_Ser-Thr 9.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1797 - - gmx:100813704 1149.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1797 3 20293855 20297274 Lja3g1797 3 20293855 20297274 ECH