Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1788 ATGGAGGCCCTCAATGCAGCTGGTTTAACCCCTCTCTCTGTGCTTTCTGATGCAAGAAAACAACCCAGAAAATTCTCATCACACCCCACAATATCTGCATGCAAAGTCTCAAACTTCTCCACCTCCACCACCAAGAAAAGAACATTTCAAGAGTGTTTATCAACAGGTTTACATGGGGGTCTGATTCTTGCAGCTTCAGTGGTAAACAGTGGAATTGCCAAAGCTTTAACCTATGAAGAAGCACTAGGCCAATCCATGAATCCGAAAATCTCTAACTCTGGAGATTTTGATGCAAATGGGTTTGTGGAAAGTGTTGCCAGCTTTGCAGGTGAGAACCCTGCAGTTGTTGCTGGAGGGGTTGCTATTTTGGCAGTGCCATTGGTTTTGTCTCAGGTTCTGAAGAAGCCTAAGGCGTGGGGTGTTGAGTCGGCGAAGAATGCGTATGTGAAGCTTGGTGCTGATGGGAGTGCTCAGTTGCTTGATATAAGAGCACCTGTGGAGATTAGGCAGGTGGGTACCCCGGATGTTGGGGGGTTGAAGAAGAAACCGGTGGCCATAGCTTACAAGGGTGATGACAAGCCAGGGTTTTTGAAGAAGCTTTCTTTGAAGTTTAAGGAACCTGAGAATACCACATTGTTTGTTCTTGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAGTTAGTCACCCTTAATGGATTCAAAGCTGCTTATGCAATTAAGGATGGTGCAGAAGGACCACGAGGATGGACGAATAGTGGTCTTCCATGGATAGCACCAAAGAAGGCATTGAGTTTGGATTTTGGCAATCTGACAGATGTGATCAATGATGCACTAGGAGACACATCTGATGGCTTGCCTGTTACTCTTGGGATTGTTGCAGCTACTGGACTGGGTCTATTAGCATTTTCTGAGATAGAAACAATTCTCCAACTTGTAGGATCAGCTGCACTTGTTCAGTTCGCAAGCAAGAAGCTTCTATTTGCAGAGGACCGGAAGAAAACACTACAGCAAGTTGATGAGTTCTTGACCACCAAAGTTGCCCCTAAAGAACTTGCTGATGAAATTAAGCAAATTGGAAAGGCTCTTCTACCAACCTCCACCAATGATAAGGCTCTTCCAGCACCAACAGAACAAAGTCCAGCGCTTGCTACAGCTGAAAGCACTGTACAGATAGCAGAAGCTACTCCTGACACGGTCTCCGAGCCCAAAGTAGACGCAGCAGCAGCATCACCTGCAGCTGAAAGCACTGTACAGATAGCAGAAGCTGCTCCTGACACAGTCTCCGAGCCCAAAGTAGACGTAGTAGCAGCGTCACTCGCTCCTGAAATAAACTCAGTGCCCAAAACTGAAGATAAGGCTGAACCAGTTCCCAAGCAACCAAAATCACTCTCACCATACCCATATTATCCAGATTTCAAGCCTCCAACATCTCCTACTCCTTCACAGCCATAG 1455 0.4619 MEALNAAGLTPLSVLSDARKQPRKFSSHPTISACKVSNFSTSTTKKRTFQECLSTGLHGGLILAASVVNSGIAKALTYEEALGQSMNPKISNSGDFDANGFVESVASFAGENPAVVAGGVAILAVPLVLSQVLKKPKAWGVESAKNAYVKLGADGSAQLLDIRAPVEIRQVGTPDVGGLKKKPVAIAYKGDDKPGFLKKLSLKFKEPENTTLFVLDKFDGNSELVAELVTLNGFKAAYAIKDGAEGPRGWTNSGLPWIAPKKALSLDFGNLTDVINDALGDTSDGLPVTLGIVAATGLGLLAFSEIETILQLVGSAALVQFASKKLLFAEDRKKTLQQVDEFLTTKVAPKELADEIKQIGKALLPTSTNDKALPAPTEQSPALATAESTVQIAEATPDTVSEPKVDAAAASPAAESTVQIAEAAPDTVSEPKVDVVAASLAPEINSVPKTEDKAEPVPKQPKSLSPYPYYPDFKPPTSPTPSQP* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1788 484 MobiDBLite consensus disorder prediction 442 484 - -
Lja3g1788 484 MobiDBLite consensus disorder prediction 461 484 - -
Lja3g1788 484 MobiDBLite consensus disorder prediction 367 387 - -
Lja3g1788 484 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 484 - -
Lja3g1788 484 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 484 IPR044240 -
Lja3g1788 484 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 143 258 IPR036873 -
Lja3g1788 484 Gene3D - 138 269 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1788 1 474 Sulfurtransferasese or Rhodanese AT4G01050 56.394 1.48e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1788 K17525 - gmx:100810796 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1788 3 20161413 20165988 Lja3g1788 3 20161413 20165988 ECH