Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1767 ATGATCAACCACAACCAAACATGTTATGCTTTCCTTACAGTTCCAGTAGCTTTGGTGGTTTTGTTTTTGCTGGCTCTATGTCATGGCACTTCAGGGCTAACACAAGCTGAGGCCTTGCTCAAGTGGAAACAAAGTCTCCCTGAACAACCAATTCTTGATTCATGGGTCACCAACTCAACTGCAAATCAGAGTCCATGTTCATGGAGAGGTGTCACTTGTGATTCTCAAGGAAGAGTCACTATAATCAACTTGGCCTACACTGGACTTGAAGGTACCCTTCAGTACTTGAATTTTTCTGTTTTCCCAAACCTTCTTGGCCTTGATCTCAAAACAAACAGCCTCACTGGCACAATACCACAAACCATTGGTGTGCTTTCAAAACTCCAATACCTTGATCTTTCCACCAATCATTTCAATGGCACTTTGCCACTTTCTATTGCCAATTTGACCCAACTTTATGAGCTTGATGTGTCAAGAAATAGCATAGCAGGGATACTAGACCCTCGCTTGTTTCCTGATGGATCAAGCCACCCCAAAACTGGTCTTATTGGTATTCAAAATCTTCTCTTCCAAGACACCCTCTTAGGTGGCAGGATCCCAAATGAAATAGGTAACATCAGATACTTGACAGTGCTAGCTCTTGATAATAACACCTTCTATGGTGCAATTCCTCCATCACTAGGAAACTGCACACATTTAAGCACTCTCAGATTGAATGAGAACTATCTCTCAGGTCCAATACCCCCAAGTATTGGCAAGTTAACCAACCTAACTGATGTGAGATTTATGTTCAACAACTTGAATGGCACCGTGCCACAAGAATTTGGAAACCTGTCCTCTCTGGTTGTGCTGCATTTTGCTGTGAACAACTTCATTGGTGAACTGCCACCACAGGTGTGTAAAAGTGGAAAGCTTGTGAATTTCAGTGCTGCAGACAACAGTTTCACTGGTCCAATTCCAGTGAGCCTCAGAAACTGCACATCATTATACAGAGTTAGAATAGAAAACAACCATCTCACAGGCTATGCAGATAAGGATTTTGGAGTGTATCCAAATCTTACTTACATGGACTTCAGCTATAACAAGGTGAAAGGTGAGCTCTCTTCAAAGTGGGGTGCCTGCAAAAATCTGCAAACACTCAAAATGGGTGGGAATTCAGTGAGTGGCAACATTCCAGGTGAGGTTTTTCAGTTAGAACAACTAACAAAACTAGACTTATCCTCCAACAAAATTTCAGGAGAGATTCCTCCACAGGTAGGAAATGCCTCAAACTTGGATGATTTAAATTTAGGTAAGAACAAACTTTCTGGCATGATACCTGTAGAAATTGGAAAACTTTCAAATTTGAGGTCTTTAGATTTGTCCATGAACATGTTATTAGGACCAATCCCAAGTCAGATAGGGGACTGCACCGGATTGATAAGTTTAAATTTTAGCAACAACGACTTGAATGGCACAATTCCATACCAAGTTGGAAATCTTTCAGCCTTACAGGAGTTTTTGGATTTGAGTGAGAACTCACTTTCAGGAGAAATTCCTTATCTTAGTAGGCTTTCAAGTTTGATAAGCTTGAATATCTCTCACAACAATCTCTCAGGTTCTATACCCGGTTCCATCAATGAAATGAGGGGCTTGTCATCCCTCAACCTCTCCTACAATCATTTGGAGGGCCCTGTTCTTAAAACAACAACAAAGGTCTATGTGGGAATATCAGGTTTACAACCTTGTCCTGTTTCGCTCATTGATGGTGGAAAGAACAAGGTTTGGATCCCCCTTGTTGCTTCTTTGGGGGGTGCTCTTGTACTTTTATTGGTGCTAGTTGGTGTTTTCTTCTTCTGTTACAAGAGGAAGGCAAGAGCTTCAAGACAAAAGTCTTCATTTAAGAGAACAAATAATCCATTTTCAATTTGGTACTTTAATGGCAGAGTTGTGTATGAAGACATAATGGAAGCTACCAAGAACTTTGACAACATGTATTGCATTGGAGAAGGGTCACTTGGAAAAGTGTATAAAGCAATGATGCCAGGAGGTCAAGTATTTGCTGTGAAAAAGTTGAAATGTGATGCAGATAACCTAGACACTGAGAGTGTAAGAAGTTTTAAGAGTGAGGTTGAGGCCATGACAGAAACAAGGCACAGAAACATTGTGAAGCTTTATGGATTTTGCTCTCATAGAGTGCACACTTTTCTGGTTTATGAGTACATGGATAGAGGAAACTTGTGTGATATGCTGAGAAATGATAAAGAAGCGTTGGAACTAGATTGGCATAAGAGGGTTGATGTTGTTAAAGGTGTAGCAAATGCTTTGTCCTACATGCACCATGATTGTGTTCCACCCTTGATTCATAGAGACATATCAAGCAATAATGTTTTGTTATCCTTCGATCTTGAAGCTCGTGTCTCAGATTTTGGCACTGCAAGGTTTCTGAAGCATGATTCACCTCTTTGGACATCATTTGCAGGCACATATGGCTATGCTGCTCCAGAGCTTGCATACACAATGGTAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGTGTTTTGGCATTTGAGATTCTGACAGGAAAGCACCCTGGTGATCTTGTTTCATACATACAAACTTCGAGTGTTCAAACGATAGACTTCAAAGAGATATTAGACCCTCGCCTCCGAGCCCCACTTCTTGCAAGGAAGAATGTTTTGAAGGAATTGGCATTGATTACAAACATAGCTCTATCTTGTTTACAAACAAATCCTCAATCTAGACCAACCATGCGAAGCATAGCTCAGTTGCTTGAAATGGAGAATGTAATCACTCTTGATTAA 2805 0.4075 MINHNQTCYAFLTVPVALVVLFLLALCHGTSGLTQAEALLKWKQSLPEQPILDSWVTNSTANQSPCSWRGVTCDSQGRVTIINLAYTGLEGTLQYLNFSVFPNLLGLDLKTNSLTGTIPQTIGVLSKLQYLDLSTNHFNGTLPLSIANLTQLYELDVSRNSIAGILDPRLFPDGSSHPKTGLIGIQNLLFQDTLLGGRIPNEIGNIRYLTVLALDNNTFYGAIPPSLGNCTHLSTLRLNENYLSGPIPPSIGKLTNLTDVRFMFNNLNGTVPQEFGNLSSLVVLHFAVNNFIGELPPQVCKSGKLVNFSAADNSFTGPIPVSLRNCTSLYRVRIENNHLTGYADKDFGVYPNLTYMDFSYNKVKGELSSKWGACKNLQTLKMGGNSVSGNIPGEVFQLEQLTKLDLSSNKISGEIPPQVGNASNLDDLNLGKNKLSGMIPVEIGKLSNLRSLDLSMNMLLGPIPSQIGDCTGLISLNFSNNDLNGTIPYQVGNLSALQEFLDLSENSLSGEIPYLSRLSSLISLNISHNNLSGSIPGSINEMRGLSSLNLSYNHLEGPVLKTTTKVYVGISGLQPCPVSLIDGGKNKVWIPLVASLGGALVLLLVLVGVFFFCYKRKARASRQKSSFKRTNNPFSIWYFNGRVVYEDIMEATKNFDNMYCIGEGSLGKVYKAMMPGGQVFAVKKLKCDADNLDTESVRSFKSEVEAMTETRHRNIVKLYGFCSHRVHTFLVYEYMDRGNLCDMLRNDKEALELDWHKRVDVVKGVANALSYMHHDCVPPLIHRDISSNNVLLSFDLEARVSDFGTARFLKHDSPLWTSFAGTYGYAAPELAYTMVVTEKCDVFSFGVLAFEILTGKHPGDLVSYIQTSSVQTIDFKEILDPRLRAPLLARKNVLKELALITNIALSCLQTNPQSRPTMRSIAQLLEMENVITLD* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1767 934 ProSitePatterns Tyrosine protein kinases specific active-site signature. 780 792 IPR008266 GO:0004672|GO:0006468
Lja3g1767 934 PRINTS Leucine-rich repeat signature 446 459 - -
Lja3g1767 934 PRINTS Leucine-rich repeat signature 401 414 - -
Lja3g1767 934 Gene3D Ribonuclease Inhibitor 263 579 IPR032675 -
Lja3g1767 934 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Lja3g1767 934 Pfam Leucine rich repeat 400 459 IPR001611 GO:0005515
Lja3g1767 934 SUPERFAMILY RNI-like 247 558 - -
Lja3g1767 934 Gene3D Ribonuclease Inhibitor 176 262 IPR032675 -
Lja3g1767 934 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 7 929 - -
Lja3g1767 934 SUPERFAMILY Protein kinase-like (PK-like) 629 927 IPR011009 -
Lja3g1767 934 SMART LRR_typ_2 398 422 IPR003591 -
Lja3g1767 934 SMART LRR_typ_2 149 173 IPR003591 -
Lja3g1767 934 SMART LRR_typ_2 278 302 IPR003591 -
Lja3g1767 934 SMART LRR_typ_2 518 542 IPR003591 -
Lja3g1767 934 SMART LRR_typ_2 446 470 IPR003591 -
Lja3g1767 934 SMART LRR_typ_2 125 148 IPR003591 -
Lja3g1767 934 Gene3D Transferase(Phosphotransferase) domain 1 735 931 - -
Lja3g1767 934 Gene3D Phosphorylase Kinase; domain 1 614 734 - -
Lja3g1767 934 Gene3D Ribonuclease Inhibitor 33 175 IPR032675 -
Lja3g1767 934 Pfam Protein kinase domain 660 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1767 934 ProSiteProfiles Protein kinase domain profile. 655 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1767 934 SUPERFAMILY RNI-like 76 296 - -
Lja3g1767 934 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 7 929 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1767 Lja-Chr3 19862378 19865593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1767 98 828 Receptor kinase-like Gene Family AT4G08850 42.021 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja3g1767 Pkinase 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1767 - - aprc:113866080 1379.39