Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1737 ATGGAATGTGAGGCTTTGAATCTTGGTTCATTGCCTCCAACCAATGCCATTGAATGCCAATACCAGCTGCTATTTGGCATTCTATTCCTTCTTCAATCAAACCTTACCTTTCTCCATTCCAATCAGAAGCTGAACCTCGGTTGCAATTTAGCAACCAGAATGAATTCTGGTTCTGTGTTAGCATTACCTCCTACTTCAGACAATGTGTTCAGAACAAGGGAGCCTCCTGATTTTGAGGATGATACTGTGGAGAGAGATCCCACCGGCCGATACCTAAGGTACAATGAAATTTTGGGCAGGGGTGCCTTCAAGACTGTTTATAGGGGCTTTGACGAAGTTGATGGAATAGAAGTTGCTTGGAACCAAGTTAAGATTGACGGCCTCTTGCATTCAGTAGATGATCTATCAAAATTGTATTCTGAAGTTAATCTATTGAAGTCTTTAAAACATGATAATATCATTAAGTTCTATAATTCTTGGATTGATGATAAGCAGAAAACTGTTAACATGATCACTGAACTCTTCACATCTGGAAACTTGAGGCAATATCGTAAGAAGCATAAATATGTTGAAATTAAAGCCATAAAATGTTGGGCCAGGCAGATTCTTCAAGGCTTAGTATATCTTCACAGTCACAAGCCACCTATTATTCATAGAGACTTGAAATGCGACAACATCTTTGTGAATGGAAACCAAGGAGAAGTTAAAATAGGAGACCTTGGTTTGGCAATTGTCATGCAGCAACCAACTGCCCGAAGTGTTATTGGGACCCCTGAGTTTATGGCTCCAGAACTATATGAAGAGGAATACAATGAACTTGTTGACATCTATTCTTTTGGGATGTGCATATTGGAGATGATTACTCTTGAGTATCCCTATATTGAATGCAAAAATCCAGCTCAAATTTATAAGAAAGTTACCTCGGGTATCAAACCCGCTTCCCTTGATAAGGTGAGTGATCCCGAAATTAAAGAGTTTATTGAGAAATGTCTGGTTCCAGCATCCGAGAGATTGTCTGCAGAGGAGCTTCTTAAAGACCCATTTCTACAGACACCTATTCAAACTCCGAGAGCTGTAGACATGGTCAAACCTGGTTCTCTATCTATGGACATAGATAATGACTGCAAACAGCTTTGTGTGAGTAACAGTGCTGAAAGCAACCAAGGAAGTTCACATTGTCCTGTTTTTGAAGTCCAAAGGACAAATAAGAACAATGCATTTAGGTTAAAAGGGACTAAAAATGACGATAACTCAGTATCTTTGACCTTGCGTATTGCGGATACATCTGGTCGAGTGAGGAATATACATTTTCTCTTTTACCTTGATACAGATACTGCAGTCTCTGTGGCCTCAGAGATGGTTGAACATTTGGAGTTGGCCGATCACGATGTGGCTTTCATAGCTGAGCTTATTGATTACTTGATAGTGAAACTTCTACCTTGGTGGAAGCCCTCACCTGATCATAAATCAAGTGGAGAATTTAGTCTTAACGGTGGTGGGTCTACAACGGCAGACAGTGAAACCTTTATGGCGTGCTCATGCGGTTCTGTCCTTACTAGTTTTCCCTCTAAATTAGCTATTGACCAGCACAACTTCTATGGGTTTAACACAGCTCCTGGAGAAAGTTTTATGACTGCTGAGAAGAGTTGTTCTTACAAAAATGTTGATAATGCCTGTTTTGACAGTGTTAGTGATTATAAGTCTTCTCCTAGTTTGTTTACCTCTGGGTTTAACACAACCCCTGGAGAAAGTTTTATGACTGCTGAGAAGAGCTGCTTTTACAAAAATGCTAATAATGCCAGTTTTGACAGTGATTATATGTCTTCTCCTAGTTTGTTTAACTTGGAAGATCGATATTCACAAGAATCCGGAGCATCTGAAATAGTTATTGAAGATGCTTCTGTGAAAAATGACGAGTTTCATGATTCCAATGTTGATGGAAGTTTTGGATGCTTAAGTAGGTCTGTCTCAGAACTTGAACTCGGGGATGCATATTTTAAGGATTGTATATTGCAAGCGACAGATTGTAGTGCCGGGTCAATTTGTGGAACATCATCCGATGTTGTGAGCAGCCGTTCTTCAGTGTCTTCAATCGAAAAGGAGATTGATCTTGAGCTAAAGTTCCAACTAGATGCAATTGAGTTACAGTATCAGCATTGGATGGAAGAACTTAATAGAATGAAGTTGGAGGCATTGGAAGCCACTAGAAGGAGATGGATGGCAAAGAAGAAAGAGGCTGTTCATTGA 2247 0.3983 MECEALNLGSLPPTNAIECQYQLLFGILFLLQSNLTFLHSNQKLNLGCNLATRMNSGSVLALPPTSDNVFRTREPPDFEDDTVERDPTGRYLRYNEILGRGAFKTVYRGFDEVDGIEVAWNQVKIDGLLHSVDDLSKLYSEVNLLKSLKHDNIIKFYNSWIDDKQKTVNMITELFTSGNLRQYRKKHKYVEIKAIKCWARQILQGLVYLHSHKPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMITLEYPYIECKNPAQIYKKVTSGIKPASLDKVSDPEIKEFIEKCLVPASERLSAEELLKDPFLQTPIQTPRAVDMVKPGSLSMDIDNDCKQLCVSNSAESNQGSSHCPVFEVQRTNKNNAFRLKGTKNDDNSVSLTLRIADTSGRVRNIHFLFYLDTDTAVSVASEMVEHLELADHDVAFIAELIDYLIVKLLPWWKPSPDHKSSGEFSLNGGGSTTADSETFMACSCGSVLTSFPSKLAIDQHNFYGFNTAPGESFMTAEKSCSYKNVDNACFDSVSDYKSSPSLFTSGFNTTPGESFMTAEKSCFYKNANNASFDSDYMSSPSLFNLEDRYSQESGASEIVIEDASVKNDEFHDSNVDGSFGCLSRSVSELELGDAYFKDCILQATDCSAGSICGTSSDVVSSRSSVSSIEKEIDLELKFQLDAIELQYQHWMEELNRMKLEALEATRRRWMAKKKEAVH* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1737 748 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 419 475 IPR024678 GO:0004674|GO:0005524
Lja3g1737 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Lja3g1737 748 Coils Coil 710 737 - -
Lja3g1737 748 Gene3D Transferase(Phosphotransferase) domain 1 175 354 - -
Lja3g1737 748 SUPERFAMILY Protein kinase-like (PK-like) 93 350 IPR011009 -
Lja3g1737 748 Gene3D - 417 512 - -
Lja3g1737 748 Pfam Protein kinase domain 95 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1737 748 CDD STKc_WNK 90 349 - -
Lja3g1737 748 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 54 573 - -
Lja3g1737 748 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 575 748 - -
Lja3g1737 748 ProSiteProfiles Protein kinase domain profile. 92 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1737 748 SMART serkin_6 92 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1737 748 PANTHER KINASE DOMAIN PROTEIN 575 748 - -
Lja3g1737 748 PANTHER KINASE DOMAIN PROTEIN 54 573 - -
Lja3g1737 748 Gene3D Phosphorylase Kinase; domain 1 77 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1737 Lja-Chr3 19409739 19413500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1737 79 580 MAP Kinase Kinase Kinase AT5G41990 52.437 3.60e-170 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lja3g1737 Pkinase 3.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1737 K08867 - gmx:100272197 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1737 3 19409739 19413500 Lja3g1737 3 19409739 19413500 ECH