Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1722 ATGACAACCCACAACCACATTGACAACTTCTGGGTCTTTGCCTTGGTCTCCAAGTGCACACAAGAAAACATTGCATGGTCGCTTTTGGTCATGGCCTCACTCTTGCTTGCCATGACTTTCTTTTACTGGTCACACCCTGGTGGTCCTGCTTGGGGCAAGTACTACTCCTATTACCACTACTGGATCACAAAAACACCCACCTCACCTCCTAATTCTTCTCCAACAACAACAAAACAACAACCAATCCCTGGTCCCAAAGGCTTCCCTTTAATTGGAAGCATGAACCTCATGTCCAACTTAGCTCACCACCGTATTTTAGCCGCTGCAAAATCATTTAACGCCACCAGGCTCATGGCCTTCAGCCTCGGCGACACGCGAACCATTGTCTCCTGCCACCCGGACGTGGCCAAAGAGATTCTCCAGAGCTCGGTCTTCGCTGATCGCCCAATCAAGGAATCCGCCTACAGCCTCATGTTCAACCGCGCCATCGGTTTCGCCCCTTACGGTGTCTACTGGCGAACCTTGAGAAAAATCGCTAACAACCACCTCTTCTGCCCTATGCAAATCAAATCCTCCGCGCCGCAGCGCGGAGAAATCGCCAACCAGATGGTCAGCCTCTTCCGAAACAACCTCGGCTCTCCGCTGACCATCCGGCAGGTTCTCAAGAAAGGCTCCCTCTACAACATGATGTGGTCGGTGTTCGGACAGAAGTACAAGCTGGCCGAGGAGGAGACGAGCAACAACCGAATGGTGGAGGAGCTGAGTGGGTTGGTTGAGAAAGGGTACGACCTATTAGGTACCCTTAATTGGGGCGACCACTTGCCTTTCCTTAAGGACTTTGATGCTCAGAAAATCCGGTTCACTTGCTCAGAGTTGGTTCCTAAGGTGAACCGGTTCGTCGGTTCAATCATCGCCGACCACCGAGCCGACAAGAACCAGACCAACCTGGATTTCGTTCATGTCTTGCTCTCTCTTCAAGGTCCTGATAAATTGTCTGAACCCGACATGATTGCTGTTCTTTGGGAAATGATATTTAGAGGGACCGACACGGTGGCGGTGTTGGTGGAGTGGATACTAGCGAGGATGGTGCTGCATCCTGATGTGCAGAGGAAGGTGCAAGAGGAGCTGGATGAGGTAGCTGATGGAGGGAAAAGGGCGGTGAAGGAGGAGGATGTGGCGGCGGCGGTGTATTTTCAGGCGGTGGTGAAGGAGGTTTTGAGGCTACACCCACCTGGCCCACTTCTCTCGTGGGCCAGGTTGGCCATCACTGATACGACCATTGATGGGTACCACGTGCCAGAGGGGACCACAGCGATGGTTAATATGTGGGCCATAGCGAGGGACCCGGAGGTGTGGAGGGACCCACTGGAATTTATGCCTGAGAGGTTCATGGGAGAAGAGAATGAGTTTTCAATATTCGGGTCAGATCTGAGGCTGGCTCCATTCGGGGCGGGTAGGAGGAGCTGCCCCGGGAAGAATCTGGGTTTGACCACCGTGACTTTCTGGGTGGCGAAGCTCTTGCATGAATTTGAATGGCTGCCATTAGATGATGGCGGCGTTGATCTGACGGAGCTGCTCAGGCTGTCTTGTGAAATGGCTAACCCTCTCACTGTTCAAGTGCGTCCTAGGCGTGAGTTGAGTTGTTGA 1647 0.5288 MTTHNHIDNFWVFALVSKCTQENIAWSLLVMASLLLAMTFFYWSHPGGPAWGKYYSYYHYWITKTPTSPPNSSPTTTKQQPIPGPKGFPLIGSMNLMSNLAHHRILAAAKSFNATRLMAFSLGDTRTIVSCHPDVAKEILQSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRKIANNHLFCPMQIKSSAPQRGEIANQMVSLFRNNLGSPLTIRQVLKKGSLYNMMWSVFGQKYKLAEEETSNNRMVEELSGLVEKGYDLLGTLNWGDHLPFLKDFDAQKIRFTCSELVPKVNRFVGSIIADHRADKNQTNLDFVHVLLSLQGPDKLSEPDMIAVLWEMIFRGTDTVAVLVEWILARMVLHPDVQRKVQEELDEVADGGKRAVKEEDVAAAVYFQAVVKEVLRLHPPGPLLSWARLAITDTTIDGYHVPEGTTAMVNMWAIARDPEVWRDPLEFMPERFMGEENEFSIFGSDLRLAPFGAGRRSCPGKNLGLTTVTFWVAKLLHEFEWLPLDDGGVDLTELLRLSCEMANPLTVQVRPRRELSC* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1722 548 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 PRINTS E-class P450 group I signature 441 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 PRINTS E-class P450 group I signature 399 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 PRINTS E-class P450 group I signature 489 512 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 PRINTS E-class P450 group I signature 479 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 Pfam Cytochrome P450 83 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 PRINTS P450 superfamily signature 489 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 PRINTS P450 superfamily signature 480 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 482 491 IPR017972 GO:0005506|GO:0016705
Lja3g1722 548 Gene3D Cytochrome P450 75 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 PANTHER CYTOCHROME P450 78A7-RELATED 5 545 - -
Lja3g1722 548 SUPERFAMILY Cytochrome P450 82 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g1722 548 PANTHER CYTOCHROME P450 78A6 5 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1722 Lja-Chr3 19273097 19275414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1722 7 544 Cytochrome P450 AT2G46660 62.569 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1722 K20619 - gmx:100798388 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1722 3 19273097 19275414 Lja3g1722 3 19273097 19275414 ECH