Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1718 ATGAGAGAGAATGCTGAATTTCAAGTGTTATTTCATCAAATGAGCCAAAAAAAGAGCCCCAAGAGCCTCCATTTGCACGGCCACCATCTCCACGGCGGCGGAGATGGGAAGAAGCAGCAAGAATTCCGAGGCGTTCCGAAAGGGTGTATGGCGATCAAGGTGGGCCAGGGCGAAGAGAAACAGAGATTCGTGGTGCCTGTGATGTACTTGAAACACCCTCTGTTCATGCAGCTTCTGAAAGAGGCAGAGGAAGAGTACGGGTTCGATCAGAAAGGAGCCATCACCATCCCTTGCCATGTCGAGGAATTCAGAAACGTTCAGGGCTTGATCGATAGGGACAAGAGCCTCCATCATCATGGATGCTTTGGCTTCTGA 375 0.504 MRENAEFQVLFHQMSQKKSPKSLHLHGHHLHGGGDGKKQQEFRGVPKGCMAIKVGQGEEKQRFVVPVMYLKHPLFMQLLKEAEEEYGFDQKGAITIPCHVEEFRNVQGLIDRDKSLHHHGCFGF* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1718 124 PANTHER SMALL AUXIN-UP RNA-RELATED 37 119 - -
Lja3g1718 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 119 IPR003676 GO:0009733
Lja3g1718 124 Pfam Auxin responsive protein 27 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1718 Lja-Chr3 19130149 19132706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1718 45 104 Calmodulin-binding Proteins AT5G20810 58.333 1.02e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1718 K14488 - gmx:111188139 173.711