Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1709 ATGAGCAGCGCCGCGAAGGCACCGAGAGCTCGAACCAGAGTGGGGAAATACGAGCTGGGGAAAACCATTGGCGAAGGAAGCTTTGCGAAGGTCAAGTTCGCCAAGAACGTGCAAACTGGTGCCCATGTTGCCATCAAAATCCTCGACCGCAACCATGTCCTCCGCCACAACATGATGGAACAGCTGAAGAAAGAAATCTCAACGATGAAGCTGATCAATCATCCAAACGTTATCAAAATATTTGAGGTGATGGCAAGCAAAACGAAGATTTACATTGTATTGGAGTTGATCAAAGGGGGAGAACTATTTGACAAAATAGCTAGACATGGAAGACTTAAAGAGGATGAAGCAAGAAGTTATTTCCAACAACTAATCAATGCAGTTGATTACTGCCATAGTAGAGGCGTGTATCACCGCGACCTGAAGCCTGAGAATCTTCTTCTGGACTCTAGTGGTGTTCTTAAAGTTTCAGATTTTGGACTGAGTACGTATTCACAGCAGGAGAATGAACTCCTCCGCACTGCTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTTCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTCCTGTGGAGTCATTCTCTTTGTACTTATGGCTGGTTACTTGCCGTTTGATGAGCCAAATCATGTGGCACTGTACAGAAAAATTAGCAGGGCTGAATTCACATGTCCATCTTGGTTTTCGCCTGAGGCTAAGAAGCTGCTGAAGTCTATTCTTGACCCAAACCCTCTAACTAGGATAAAAATTCCTGAAATCCTAGAAGATGAATGGTTCAAAAAAGGATACAAGCCACCATCTTTTAAAGAGGAAGAGGATATCAATGTAGATGATGTAGCTGCTGCTTTCAATGATTCTAAGGAAAATCTTGTGACAGAGAGGAAAGAGAAACCCGAATCGATGAATGCTTTTGAGCTCATTTCAAGATCGCAAAGCTTCAATCTTGACAGTTTGTTTGAGAAGCAGATAGCACAGGGGGTTGTAAAGCGCGAAACACATTTCACATCTCAGCGACCTGCAAATGAAATTATGTGTAAAATTGAGGAAGCTGTCAAGCCTTTGGGATTTAATGTTCACAAGAGAAATTATAAGATGAAGCTGCAAGGTGATAAGAGTGGAAGGAAGGGTCACCTTTCAGTGGCCACTGAGGTTTTCGAAGTGGCTCCCTCCTTGCACATGGTGGAGCTGCGAAAGACCGGGGGTGACACACTCGAGTTTCACAAGTTCTACAAAAACTTTTCATCAGGGTTGCAAGACATAGTGTGGCATCCTCAAGAAAAATAA 1317 0.432 MSSAAKAPRARTRVGKYELGKTIGEGSFAKVKFAKNVQTGAHVAIKILDRNHVLRHNMMEQLKKEISTMKLINHPNVIKIFEVMASKTKIYIVLELIKGGELFDKIARHGRLKEDEARSYFQQLINAVDYCHSRGVYHRDLKPENLLLDSSGVLKVSDFGLSTYSQQENELLRTACGTPNYVAPEVLNDRGYVGSTSDIWSCGVILFVLMAGYLPFDEPNHVALYRKISRAEFTCPSWFSPEAKKLLKSILDPNPLTRIKIPEILEDEWFKKGYKPPSFKEEEDINVDDVAAAFNDSKENLVTERKEKPESMNAFELISRSQSFNLDSLFEKQIAQGVVKRETHFTSQRPANEIMCKIEEAVKPLGFNVHKRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKNFSSGLQDIVWHPQEK* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1709 438 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Lja3g1709 438 Pfam Protein kinase domain 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1709 438 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 8 436 - -
Lja3g1709 438 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Lja3g1709 438 SMART serkin_6 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1709 438 SUPERFAMILY Protein kinase-like (PK-like) 14 289 IPR011009 -
Lja3g1709 438 Gene3D Transferase(Phosphotransferase) domain 1 97 298 - -
Lja3g1709 438 Pfam NAF domain 309 371 IPR004041 GO:0007165
Lja3g1709 438 CDD CIPK_C 313 428 - -
Lja3g1709 438 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Lja3g1709 438 Gene3D Kinase associated domain 1, KA1 306 434 - -
Lja3g1709 438 ProSiteProfiles Protein kinase domain profile. 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g1709 438 PANTHER - 8 436 - -
Lja3g1709 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1709 Lja-Chr3 19001128 19008922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1709 7 434 CBL-interacting serine-threonine protein kinases AT1G01140 74.943 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lja3g1709 Pkinase 4.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1709 - - lja:Lj3g3v2483040.1 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1709 3 19001128 19008922 Lja3g1709 3 19001128 19008922 ECH